Sciurus carolinensis (gray squirrel): 124966646
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Entry
124966646 CDS
T08117
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04142
Lysosome
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124966646
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124966646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124966646
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Others
AP-1 complex
124966646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Katanin_con80
DUF5609
Motif
Other DBs
NCBI-GeneID:
124966646
NCBI-ProteinID:
XP_047384114
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Position
16:complement(13237889..13317201)
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AA seq
825 aa
AA seq
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MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRW
HIDTIMRVLTTAGNYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAA
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRF
TCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTE
IVQTNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDITPVIPTAPTSKPASAGGELL
DLLGDITLTGAPAAAPAPASVPQITQPPFLLDGLSSQPLFNDIAAGIPSITAYSKNGLKI
EFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGT
ITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccccatcagattgcgggagctgatccggaccatccggacagcccgaacccaa
gctgaagaacgagaaatgatccagaaagaatgtgctgcaatccggtcatcatttagagaa
gaagacaatacataccggtgtcgaaatgtggcaaaattactatatatgcacatgctgggc
taccctgctcactttggacagttggagtgcctaaagcttattgcttctcagaaatttaca
gacaaacgcattggctatttaggagcaatgctgctactagatgaaagacaagatgtccat
cttcttatgaccaactgtatcaaaaatgatcttaatcatagcacgcagtttgtgcagggg
ctagcactttgtacccttggctgtatgggctcctcagagatgtgcagagatcttgcagga
gaggtagagaagctcctgaaaacctctaattcttacttaaggaaaaaggcagcactgtgt
gctgttcatgtcatcaggaaggttcctgaacttatggagatgttcttaccagcaacaaaa
aatttattgaatgagaagaaccatggtgtccttcacacatctgtagtcctcctcacagaa
atgtgtgagcgaagcccagacatgcttgcacatttcagaaagaatgaaaagcttgtgccc
caattagttcgtattctaaagaacctcatcatgtccggatattccccagaacatgatgtt
tctggtatcagtgacccctttttgcaggtgcgaattttgcggttattaagaattttagga
cgaaatgatgatgattcaagtgaagctatgaatgatatattagcacaggttgccactaac
acagagactagtaaaaatgtaggaaatgctattctttatgaaacggttttgactatcatg
gatattaaatcagagagtggactgcgagttctagccataaatatcctgggtcgtttctta
ttgaacaatgacaaaaatattagatatgtagctctgacatctttgttgaagactgtgcaa
acggatcataatgcagtacagaggcacagaagcacaattgtggactgtctaaaagatttg
gatgtctcaataaaacggcgtgcaatggaattgagttttgccctagtaaatggaaataat
attcgaggcatgatgaaggaattactttattttctggattcctgtgagccagaatttaag
gcagactgtgcatctggaatctttcttgctgcagaaaagtatgcaccttctaaacggtgg
catatagacacaattatgcgtgttctgacaactgcaggaaattatgttcgtgatgatgca
gtccccaatttgatccagttaataaccaatagtgtggagatgcatgcctacactgtccag
cgcttgtacaaagcaattcttggtgattattctcaacaacctttggtacaagtagctgca
tggtgtataggtgaatatggtgatcttcttgtatctggccaatgtgaagaggaggagcct
attcaggtaacagaggatgaagtgttggatattttagaaagtgtcctaatctctaatatg
tccacctctgtaacacgaggttatgccctcactgccattatgaagctttctactcgattt
acctgtactgtaaaccgaattaagaaagtggtttccatctacggcagcagcattgatgta
gagctccagcagagggcagtagaatataatgcactttttaagaaatatgaccatatgagg
tctgccctacttgaaagaatgcctgttatggaaaaagtgaccacaaatggccctactgag
attgtgcagacaaatggagagacagaaccagctccactagagaccaaaccaccaccctct
gggccacagcccaccagccaggccaatgatttattggatttgttgggaggaaatgacatc
acacctgttattccaactgcacctacaagcaaaccagcttctgctggtggagaacttctt
gatttgcttggagacatcacccttacaggtgctcctgctgctgctcctgcccctgcctca
gtcccacagataacccagccccccttcttgttggatggcctttcatcccagcctctcttc
aatgacattgctgcaggtatcccctccatcacagcatacagtaagaatggtttgaagata
gaattcacctttgaacggtcaaacaccaaccccagtgtaactgtgataacgatacaggcc
tctaacagcacagagttagacatgacggactttgttttccaggctgcagtaccaaagaca
ttccagctgcagcttctgtctcctagcagcagcattgtcccagcatttaatacggggacc
atcacacaagtcatcaaggttctgaacccacagaagcaacagctgcgaatgcggatcaag
ctcacatataatcacaagggctcagcaatgcaagatctagcagaggtgaacaactttccc
cctcagtcctggcaatga
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