Sciurus carolinensis (gray squirrel): 124966771 Help Entry 124966771         CDS       T08117                                  Name (RefSeq) protein NLRC5-like   KO K22615   NLR family CARD domain containing 5 Organism ncar  Sciurus carolinensis (gray squirrel) Brite KEGG Orthology (KO) [BR:ncar00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ncar04054]     124966771 Pattern recognition receptors [BR:ncar04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    124966771 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Atypical_Card NACHT LRR_6 LRR_4 NLRC4_HD2 AAA_16 nSTAND3 NOD2_WH NPHP3_N AAA NB-ARC LRR_8 ABC_tran AAA_25 AAA_22 TsaE RsgA_GTPase AAA_33 VapE-like_dom AAA_30 Motif Other DBs NCBI-GeneID:  124966771 NCBI-ProteinID:  XP_047384390 LinkDB All DBs Position 16:complement(26948594..27034555) Genome browser AA seq 1859 aa AA seqDB search MDPISLQLGTRNLCSWLMKLLSTQPEWLSTKMKFFLPNVDLGSSEEAPDPEQRVILQLRM LHTQGPATWQSFIHCVCMELEVPLDLEVLLMSTWGQEDELGVDERHRLGPQLQHGLKRPP QSCGSSPRQKRCRKQQLELARKYLQLLRASARRQCGDGLPRPGQTPTAQQAYVPPILQWS RTTAPLDTREGAIVGNPKAEDSTNISIQDLFNFKAKGPQVTVLLGKAGMGKTTLARQLCR KWADGQLDHFQALFLFEFRQLNLLTSFLTLPQLLFDLYLSPESGPDVVFQYLKENANRVL LIFDGLDEAVHPCSSKETVAAGGSSPALTLFSDLCHGTLLPGCWVMATSRPGKLPACLPT EAAMVHMWGFDGLRVEEYVSHFFSEHPAQEVALAELRGNGHLQSMCAVPALCQVACLCLR HLLSGNPPGQSAALLPTVTQLYMQMVLTLSPHGSLPAKSLLGLGEVALRGLETGKVIFYA GDIPPAIMAFGATHSLLTSFCVHTNPGHQVTGYAFTHLTLQEFFAALHLMASPTVDKDTL AGHVTLNSHWVLRTKARLNLSDHLPTFLAGLASRTCHPFLKHMAQRNEDWVGARQATVIQ VLRKLATRKLTGPKVVEMCHYVAETQEAELAGLTAQSLPDQLPFHNFPLTYRDLAALTNI LEHRAAPIHLDFEGCSLEPHCPEALIGCGQVETLSFKSRRCGDAFAEALSRSLPTMGNLK RLGLAGSKTTARGIGHLVQALPLCPQLEEVSFQDNQLKDQEVLSIAEVLPRLLRLRKLDL SRSSFSTATVLSLVKVAVMCPTVRVLQVRETDLIFLLSPLEGTAAELQRTSDLQEKDRQR KETEDRRLALRLQKCQLRVHNVEVFIALLLEGPPLEEVDLSGNQLEDEGCRLLTEAASQL HITRKLDLSDSGLSVDGVSCVLSTLSTCQTLETLHISLLHRTAVLTFTQEPKEQEGTRER AAFLDSLMSPLSCEPPLGSRWIRLTHCGFQTKHLEQLCKALGGNRHLGHLDFSGNSLGDE GVTLLAQLLPGLGPLQSLNLSENGISLSAVSSLSQCLSTLQWASRLDVSLESQQILLQGD RRGREASMGGSSPECPVGAQSLGFGERSIRRSFCLKECQLEPLSLISLCATLEQCPGPLE VQLSCKNLSDQSLETLLYCLPRLPQLRLLQLSQTGLSPRSPLLLADVFSQCPRVHKVDLR SLSHAALHFRPGEEKGGVCCGFRSCGLSLEHVEPLCCLLSKCGDLSQLDLSANLLGDDGL RCLLEHLPQVPLSGSLDLSHNGVSREGVLQLLETLPARPPVREASVNLGSTQDFWIHFSK QEETKQTTLRLSECSFGPEHVPRLATSLSQAHQLTDVTLSRCCLDLKQLTLLLRLLRPPA GLLHLRVEEPWVGSAGLPALLEACARASGLVTALCISETQQQLCVQLDFPRREEKPEAVA SRLAHSDLVRQLIETCARLRRLSLSQVNLRDTSNGSSLLQSLLLSVSELRSFRLTSSCVS PESLDHLASGLGHCHHLEELHFSGNWLSEEGTWALMGALQGMCRLKRLDLSHLLLGDSML DKLTQGLSHMTLLQSLRLSGNSIGDVGCCHLSEALRAATSLEELGLSHNGIGDAGAQHLA TILPKLPELRKIDLSANGIGLAGGAQLAESLPLCRKLEELVLGCNAMGDPPARGLARGLP QHLRVLHLPSSHLGPEGALSLCRALDGCPCVEEISLAENSLAKGLPRFCKGLPKLQRLDL VSCDLDNQAAKGLAASFTLCPALEEILLSWNLLGDEAAAALAQVLPRMGRLKRVDLEKNQ ITAYGAWLLAEGLAQGPGIQVIRLWNNPVPADVAQHLQSQEPRLDFTFFDKQPQAPRGT NT seq 5580 nt NT seq  +upstreamnt  +downstreamnt atggaccccattagcctccagctgggcaccaggaacctgtgtagctggctcatgaagctg ctgagcacacagccagaatggttgagcaccaagatgaagtttttcctccctaacgttgac ctaggctccagtgaagaggcccctgaccctgagcagagagtcatcctgcagctcagaatg ctgcacacccaggggccagccacctggcagtcgttcatccactgcgtgtgcatggagttg gaggtgcctctggacctggaggtgctactgatgagcacttggggccaggaagatgagctg ggagtggacgagaggcaccgacttggacctcagctccagcatggcctcaagcgccctccc cagagctgtggttcctcacctcgtcagaagcgctgcaggaaacaacagctagagctggcc aggaagtacctgcagctcctgagggcctctgcccggcggcagtgtggtgatggactcccc aggccagggcagacccctactgcccagcaagcctacgtccccccaatcctgcagtggagc cggaccacagcacccttagacactcgagagggagccattgtggggaaccccaaggcagaa gatagcactaacataagcatccaggacctcttcaacttcaaggccaagggcccacaggtg acagtgctcttgggtaaggctggcatgggcaagaccacactggcccgccagctctgccgg aagtgggctgatggtcagctggaccatttccaggccctgttcctttttgaattccgccag ctgaacctgctcacgagcttcctgacgctgccccagctcctctttgatctctacttgagc ccagagtcgggccccgacgttgtcttccagtatctgaaggagaatgccaaccgcgtcctg ctgatctttgacgggctggacgaggctgtccacccctgctccagcaaggagactgtggct gctggtggctcaagcccagcccttaccctcttctccgacctctgccatggtaccctgctt cccggctgctgggtgatggccacctcccgtccggggaagctgcctgcctgcctgcccacc gaggcagccatggtccacatgtggggctttgacggactgcgggtggaggagtacgtgagc cacttcttcagtgagcatccagcacaggaggtggccctcgcagagctgcggggaaatgga catctccagagcatgtgtgcggtgcccgctctgtgccaggtcgcctgcctctgcctccgc catctgctctctggaaatccccccggccagtctgcagccctcctccccacggtgacccag ctctacatgcagatggtgcttaccctcagcccccatgggagtctgcctgccaaatccctg ctgggcctgggagaggtggccctgaggggactggagaccgggaaggtcatcttctacgca ggagacatccctcctgccatcatggccttcggggccactcacagcctgctgacctccttc tgtgtccacacaaaccctgggcaccaggtgacaggctatgcttttacccacctcaccctg caagagttttttgctgccctgcatctgatggccagccccacggtggacaaagacacactt gctggccatgtcactctgaattcccactgggttctgcgaaccaaagccagacttaacctc tcagaccacctccccaccttcctggcgggcctggcatcccgcacctgccatcctttcctc aagcacatggctcagaggaatgaggactgggtgggggccaggcaggccactgtcatacag gtgctgaggaagttggccacccgcaagctcacgggaccaaaggtggtggagatgtgtcac tatgtggccgagacgcaggaggctgagctggctggtctcactgcccaaagcctccccgat caactccccttccacaatttcccgctgacctacagagacctggctgccctgaccaacatc ctagagcacagagctgcccccattcacctggattttgagggctgctcactggagccccac tgtcctgaggctctgataggctgtgggcaggtagagactctcagctttaagagcaggagg tgcggggacgcgtttgcagaagccctctctaggagcctgccaacgatggggaacctgaag aggctggggttagcaggaagtaagaccactgcccgaggcatcggccacctggtgcaggcc ttgcccctctgcccgcagctggaagaagtcagtttccaggacaaccagctcaaggatcag gaggtgctcagcatcgcggaggtacttccccgcctgctgcggctccggaagctcgacctg agccgcagcagcttctccacagcaacagtactgtccttggtgaaggtggcagtcatgtgc cctaccgttagggtgctgcaggtcagggagacagacctcatcttccttctttccccactt gaagggacagctgcagagctacagagaacttcagacctacaggaaaaagaccgccagagg aaagagaccgaggacagaaggctggctctcaggctccagaaatgtcagctcagggtccat aatgtggaggtcttcatagccctgctcctggaaggcccgcctctggaggaagtggacctc tcagggaatcagctggaagacgaaggctgccggctcctgactgaggctgcttcccagctg cacatcaccaggaagctggacctcagcgacagtgggctctccgtggacggcgtgtcctgt gtgctgagcaccctgagcacgtgccagacgctggaaacgctgcatatcagcctgctgcac agaactgcggtcctcacgtttacccaagagcccaaagagcaggaggggacccgggagagg gctgcatttcttgacagcctcatgtcccctctgtcgtgtgagccacccctgggctcccga tggatcaggctgacgcactgtggcttccagaccaagcacctggagcagctctgcaaggcg ctgggaggaaaccgccacctgggtcacctcgacttctcaggcaactccctgggagatgaa ggggtgaccctgctggcccagctgctccctgggctgggccccctgcagtccttgaacctc agtgagaatggcatatccctgagtgccgtgtccagtttgtcccagtgcctgtctactctg cagtgggcctcccgcctggatgtcagcttggagagccagcagatcctcctgcagggtgac aggagaggcagagaggcatcgatgggtggctcttctccagagtgcccggtcggagcccag tccctggggtttggtgagcgcagcatccgcaggagcttctgcctcaaggagtgtcagctg gagcctctgagcctcatcagcctctgcgccactctggagcagtgtccagggcccctggaa gtccaattatcctgcaagaacctgagcgaccagagcctggagaccttgctgtactgcttg ccccggctcccccagctgcgcctgctgcagctgagccagacagggctgtccccaagaagc cccttgctgctagccgacgtcttcagccagtgcccacgggttcataaggtggatctcagg tccctgtctcacgcagcgctgcacttcagacctggcgaggagaagggaggcgtgtgctgt gggtttaggagctgcggcctgagcctggagcacgtggagcccctgtgctgcttgctgagc aagtgcggagacctcagccagctggacctctcggcaaacctgctgggcgatgacggtctc agatgcctcctggaacacctgccgcaggtgcccctctcggggtcgcttgacctgagtcac aacggcgtctcccgggaaggtgtgctgcagctgctggagaccctgcccgcccgcccgccg gtccgcgaggcctccgtgaacctgggctccacgcaggacttctggattcacttctccaag caggaggagaccaagcagacgacacttaggctgagcgagtgcagctttgggccagagcac gtgcccagactggccaccagcctgagccaggcccaccagctgacagatgtcacgctgagc cggtgctgcctggacctgaagcagctgaccctccttctgcgtctgctgaggccaccggca gggctgctccacctcagggtggaggagccgtgggtgggcagcgcggggctgcccgccctg ctggaggcctgcgcccgggcctcgggcctcgtcactgcactatgcatctcggagacccag cagcagctctgcgtccagctggactttcctcgccgggaagagaagccagaggctgtggcc tccaggttggctcactctgaccttgtcagacagctgatagagacatgtgccaggctgcgg cggctcagcttgtcccaggttaacctccgtgataccagcaatggaagctccctgctgcaa agcctcctgctgtccgtctcagagctgaggagcttccggctgacctcgagctgcgtgagc cccgagagcctcgaccacctggcatctggcctgggccactgccaccacctggaggagctg cacttctccggcaactggctcagtgaggagggcacctgggcactgatgggggctctgcag gggatgtgcaggctgaagagactcgacctcagtcaccttctgctgggtgactccatgctg gacaagctcacgcaaggactcagccacatgaccctcctgcagagcctccgactgagcggg aacagcattggtgacgtcggctgctgccacctttccgaagctctcagagctgccaccagc ttggaggagctgggcctgagccacaacgggattggagatgccggggcccagcacttggcc accatcctcccaaagttgcctgagctcaggaagatagacctctcagcgaatggcatcggc ctggcggggggagcacagctggccgagtccctccccctctgcaggaagctggaggagctg gtgcttggctgcaacgctatgggggacccccctgcccggggactggctcggggactgccc cagcacctgagggtcctgcacctgccttccagccatctgggtccggagggggcgctgagc ctctgtcgggccctggacggatgcccatgcgtggaagagatcagcttggcggagaacagc ctggctaaagggctcccacgcttctgcaaggggctcccgaagctccagcggctggacctg gtctcctgtgaccttgacaaccaggccgccaagggcctcgccgccagcttcacgctctgt ccagcccttgaggaaatcctgctgtcctggaatcttctcggggacgaggcagcggccgcg ctggcccaggttctgccccggatgggccggctgaagagagtggacctggagaagaatcag atcacagcttatggagcctggcttctggcagaaggcctggcccaggggcctggcatccaa gtcatccgcctctggaataaccccgtccccgctgacgtggcccagcatctgcaaagccag gagcccaggctggacttcaccttctttgacaagcagccccaggcccctcggggtacttga

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