Sciurus carolinensis (gray squirrel): 124966783
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Entry
124966783 CDS
T08117
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124966783
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124966783
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
EGF_3
FXa_inhibition
EGF
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
124966783
NCBI-ProteinID:
XP_047384426
LinkDB
All DBs
Position
16:50163381..50190125
Genome browser
AA seq
1633 aa
AA seq
DB search
MRRPGPRGRRPLLLVLLLPLLSATATTAGPSPSPSPSPSPSQAVEVALVSGRPAGVAACR
CCLGQTPRRSRCIRASCRVRSCPPEKCIDPQRCLTPIPPVPSPSPSTRKRQVSLNWQPLT
LQEARDLLRRRRPRGPGSRALQKRRPPQRAPAGQARVLCPLICHNGGVCVKPDRCLCPPD
FAGKFCQLHSSGARPPAPAMPGLTRSVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVV
HQVERVSGPWEEADAEAVARAEAVARAEAAAPYTVLAQSAPREDGYSDVSGYGYCFRELR
GSECASPLPGLRTQEVCCRGTGLAWGVHDCQPCSEHLGNSNRVGAPDGPCPAGFERVNGS
CEDVDECATGGRCQHGECANTRGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLH
DGGCSLPILRNITKQICCCSRVGKAWGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRY
NTRPLGQEPPRVSLSQPRAPPVTLRPPIGFLPTHRPEPRPEPRPEPRPEPRPVPELPLPS
IPAWTGPEIPESGPSSVVCQRNPQVCGPGRCIPRPSGYTCACDSGFRLSPQGTRCIDVDE
CRRVPPPCAPGRCENTPGSFRCVCGPGFRAGPRATECLDVDECQRVPPPCDRGRCENTLG
SFLCVCPAGYQAAPHGASCQDVDECTQSPGLCGRGVCENLSGSFRCVCPAGFRGSSCEED
VDECAQEPPPCGPGRCDNTAGSFHCACPAGFRSRGPGAPCQDVDECARSPSPCAYGRCEN
TEGSFQCVCPTGFQPNAAGSECEDVDECENRLACPGQECVNSPGSFQCRACPAGHHLHRG
RCTDVDECSSGAPCGLHGHCTNTEGSFRCSCAPGYRAPSGLPGPCADVNECLEGDFCFPH
GECLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSGLCTNTDGSFECVCPPGHR
AGPDLASCLDIDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDVDECQE
YGPAICGAQRCENTPGSYRCVPACDPGYQPTPGGGCQDVDECRNRSFCGAHAVCQNLPGS
FQCLCDQGYEGARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPTSPEEFDPMTGR
CIPPRTSAAAFPGSQPQAPASPNLPARPPPPSPPRRPSTPRQGPVGSGRRECYFDTAAPD
ACDNILARNVTWQECCCTVGEGWGSGCRIQQCPSTETAEYQSLCPHGRGYLAPSGDLSLR
RDVDECQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHAQRLECVDNDECADEEPACEGGR
CVNTVGSYHCTCEPPLVLDGSRRRCVSNESQSLDDNLGVCWQEVGPDLVCSRPRLDRQAT
YTECCCLYGEAWGMDCALCPAQDSDDFEALCNVLRPPAYGPPRPGGFGLPYEYGPDIGPP
YQGLPYGPELYPPPVLPYDPYPPPPGPFARREAPYGAPPFDMPDFEDDGGPYGDSEAPVP
PSRGTGWPYRSRDTRGSFPEPEESSEGRGYTDALAEPYEGLEAEECGILDGCAHGRCVRV
PEGFTCDCFDGYRLDITRMACVDINECDEAEAASPLCVNARCVNTDGSFRCICRPGFAPT
HQPHHCAPARPRA
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgccctggccccagaggccgccgccccctcctgctggtgctgctgctaccgctc
ctctcagccaccgccaccaccgcgggccccagccccagccccagccccagccccagtccc
agccaggccgtcgaggtcgcgttggtctcgggtcgtcccgccggcgttgctgcttgtcgc
tgctgcctaggccagacacccaggaggagccgctgcatcagagcctcctgcagggtccga
agctgcccacctgaaaagtgcatagaccctcagcggtgccttaccccaatacctccagtg
ccaagtcccagccccagcacaaggaagagacaggtgtccctcaactggcagccactgaca
ctgcaggaggcccgagatctgctgaggcgacggcggccccgagggccagggagccgggcg
ctgcagaaaaggaggcccccacagcgcgcccctgccggccaggcccgggtcctgtgtcca
ttgatctgtcacaacggcggcgtgtgcgtgaagcctgaccgctgcctctgtcccccggac
ttcgctggcaagttctgccagttgcactcttcaggcgcccgacccccggccccagccatg
ccaggcctcactcgttccgtgtacaccatgccactggccaaccatcgcgatgatgaacac
ggcgtggcgtctatggtgagcgtgcatgtagagcacccacaagaggcgtcggtggtggtg
caccaggtggagcgtgtgtctggcccgtgggaagaggcggacgccgaggcagtggctagg
gctgaggcggtggcgcgagcggaggcggcggcgccctatacggtgttggcacagagcgcg
ccacgagaggacggctactccgacgtctcaggctacggttattgctttcgggagctgcgc
ggaagcgaatgtgcgtctccgcttcccggactccggactcaagaggtctgctgccgaggg
actggcttggcctggggggttcacgactgtcagccttgctcagagcacctggggaactcc
aaccgagtgggtgccccagatggaccttgtccggccggcttcgagagggttaatgggtcc
tgcgaagatgtggatgagtgcgctacaggtgggcgctgccagcacggcgagtgtgccaac
acgcgcggcgggtacacgtgcgtgtgccccgatggctttctgcttgattcatcccgcagc
agttgcatctcccagcacgtgatctcagaggccaaggggccctgcttccgcgtgctccac
gatggcggctgctcgctgcccattctgcgcaacatcaccaagcagatctgctgctgtagc
cgtgtgggtaaggcctggggccgaggctgccagctctgcccaccttttggctcagagggt
tttcgagagatctgtccagctggccctggttaccactactcggcctctgacctccgctac
aacaccagacccctgggccaggaaccacctcgagtatccctcagccagccacgtgcccca
ccagtcacccttcgtccacccataggctttctgcccacacatagacctgagccccggcct
gagccccggcctgagccccggcctgagccccggcctgtccctgagcttcccctgcccagc
attcctgcctggactggtcctgagattcctgaatcaggtccctcttcagtcgtgtgtcag
cgcaacccccaggtctgtggcccaggacgctgcatacctcggcccagcggttacacttgt
gcgtgtgactcgggtttccggctcagcccccagggcacccgttgcatcgacgtggatgaa
tgtcggcgagtacccccgccttgtgctcccgggcgctgcgagaacacaccaggcagcttc
cgctgcgtgtgcggcccgggcttccgagccggcccgcgggctacggagtgcctggacgtg
gacgagtgccagcgcgtgccgccgccgtgtgaccgcgggcgctgcgagaatacgctaggc
agcttcttgtgcgtgtgccccgctgggtaccaggcagcaccacacggagccagctgccag
gatgtggacgagtgcacccagagcccaggcctatgtggccgaggggtctgtgagaacctg
tccggctctttccgctgtgtttgcccggctggcttccggggttcgtcgtgtgaagaagat
gtggatgagtgtgcccaggagccgccaccctgtgggccaggccgctgtgacaacacggct
ggctcctttcactgtgcctgccccgctggcttccgctccagaggacctggggccccctgc
caagacgtggatgagtgtgcccgtagcccctcgccttgtgcctacggccggtgtgagaac
acagagggcagcttccagtgcgtctgccccacaggctttcaacccaatgccgctggctct
gagtgcgaggatgtggatgaatgtgagaaccgcctggcatgtcctggacaggagtgtgtg
aactcgcctggctctttccaatgcagggcctgtcctgctggccaccatctgcatcgtggc
agatgcactgatgtggacgaatgcagttctggcgccccctgcggtctccatggtcactgc
actaacaccgaaggctccttccgctgcagctgtgcaccagggtaccgggccccatcgggt
ctgcctgggccctgcgcagatgtcaatgagtgtctggagggcgacttctgtttccctcac
ggagagtgcctcaacaccgatggttcctttgcctgtacttgtgcccccggctaccggccc
ggaccccgcggagcatcttgtctcgacgtggatgagtgcagcgaggaggacctttgccag
agcggcctctgtaccaacaccgacggctccttcgagtgcgtctgtcccccgggacaccgc
gccggcccagacctcgcctcctgcctggacattgatgaatgtcgtgagcggggccccgcc
ctgtgcgggtctcagcgctgtgagaactcccccggctcctaccgctgtgtccgggactgc
gatccgggctatcacgcgggccccgagggcacctgtgatgatgtggatgaatgccaagaa
tatggccctgcaatttgtggagcgcagcgttgtgagaacacccctggatcctaccgctgc
gtgccagcctgtgaccccggctaccagcccacgccagggggtggatgccaggatgtggac
gagtgccggaaccggtccttctgtggcgcccatgctgtgtgccagaacctgcctggatcc
tttcaatgcctctgtgaccagggctacgagggggcgcgggacgggcgtcactgcgtggat
gtgaatgagtgtgaaacactgcagggtgtttgtggagctgccctatgtgaaaatgttgaa
ggctccttcctgtgtgtctgccctaccagccctgaggaatttgaccccatgactggacgc
tgtattcccccacggacttctgctgctgcatttccaggttcacagccccaggcacctgcc
agccccaacctgccggccaggccacccccaccatccccaccccgcagacccagcacacct
aggcagggtcccgtgggcagcgggcgccgggagtgttactttgacacagcagccccagat
gcatgtgacaacatcctggcccggaacgtgacgtggcaggagtgctgctgtaccgtgggc
gagggctggggcagtggctgccgcatccagcagtgcccaagcacggagacagctgaatat
cagtcattgtgcccccacggccggggctatctggcgcccagtggagacctaagtctaagg
agagatgtggacgaatgtcaactcttccgagaccaggtgtgcaagagcggggtctgcgtg
aacacggccccaggctactcgtgttattgcagcaacggatactactaccatgctcagcgg
ctggagtgtgttgataatgacgagtgcgctgacgaggagccagcttgtgaaggaggccgc
tgtgtcaacacggtgggctcttatcactgcacgtgcgagcctccgctggtgctggacggc
tcgcggcgccgctgcgtctccaacgagagtcagagtctggatgacaatctgggagtgtgc
tggcaggaagtagggcctgacctcgtttgtagtcgcccacggctggaccgtcaggccacc
tacacagagtgctgttgtctctatggagaagcctggggcatggactgtgccctctgccct
gcccaggactcagatgactttgaggccctgtgcaatgtgctgcgcccccctgcgtatggc
ccccctcggccaggtggctttgggctcccttatgagtatggcccggacataggtccccct
taccagggcctcccctatgggcccgagttgtacccaccacctgtgctgccctatgacccc
tacccaccccctcctgggccctttgcccgccgggaagccccctatggggcaccacccttc
gacatgccggactttgaggatgatggtggcccgtatggtgactctgaggctcctgtgcca
cccagccggggcaccggctggccctaccggtcccgagacacccgtggctctttcccagag
cctgaggagtcctctgaaggtcgaggctacactgacgccctggccgagccctacgagggg
ctggaggccgaggagtgcgggatcctggatggctgtgcccacggccgctgtgtgcgcgtt
cctgagggcttcacctgtgactgtttcgacggctaccgcctggacataacccgcatggcc
tgtgtcgacatcaacgagtgtgacgaggcagaggcggcctccccgctctgtgtcaacgcg
cgctgcgtcaacaccgatggctcctttcgctgtatttgccgcccaggatttgcacccaca
caccagccacaccactgcgcacctgcgcggccccgcgcctga
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