Sciurus carolinensis (gray squirrel): 124966784
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Entry
124966784 CDS
T08117
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124966784
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124966784
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124966784
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
124966784
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
124966784
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124966784
Prokaryotic type
Other AARSs
124966784
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Dec-1
Motif
Other DBs
NCBI-GeneID:
124966784
NCBI-ProteinID:
XP_047384430
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Position
16:10842510..10859598
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AA seq
625 aa
AA seq
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MLMQAAVRLVRGSLRQTSWAEWGQRELRLGQLAPFTALHKDKPLSNKRSELKRRLKAEKK
VAEKEAKQKELSEKQLSQATAAATNHANENGVGSEEESLDPNQYYKIRSQAVHQLKVNGE
DPYPHKFHVDISLTHFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGV
KLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHM
LPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMN
IIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN
PEFTTCEFYMAYADYHDLMEITEKMVSGMVKNITGNYKITYHPDGPEGQAYEIDFTPPFR
RISMVEELEKALGVKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFL
EVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLF
EEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFPA
MKPEDKKDTVATTDRPESTTVGTSV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagctgctgtaaggcttgttagggggtccctgcgccaaacctcctgggca
gagtggggtcagagggaacttcgactgggtcaacttgctcctttcacagcgcttcacaag
gacaagccactttctaataaaagaagtgaactaaagagacgcctgaaagctgagaagaaa
gtggcagagaaggaggccaagcagaaagagctcagtgagaaacagctaagccaggccact
gctgctgccaccaaccatgccaatgaaaatggtgtgggttctgaggaggagagcctggac
ccaaatcaatactacaagatccgcagtcaagcagtccatcagctgaaggtcaatggggag
gacccctacccacataagttccatgtagatatctcgctcactcacttcatccaagaatat
agtcacctgcagcctggggatcacctgactgacatcaccttgaaggtggcaggtaggatc
catgccaaaagagcttctgggggaaagctcatcttctatgaccttcgaggagagggggtc
aagttgcaagtcatggccaattccaggaattataaatcggaggaagaatttattcatatc
aataacaaactgcgccggggagacataattggagttcaggggaatcctgggaaaaccaag
aagggtgagctgagtatcattccctatgagatcacactgctatctccctgcttgcatatg
ctacctcatcttcactttggcctcaaagacaaggaaacaaggtatcgtcagagatacttg
gacttgatcctgaatgactttgtgaggcagaaatttatcattcgctctaagatcatcaca
tacatacgaagtttcttggatgagttgggatttctagagattgaaactcctatgatgaac
atcatcccagggggagctgtggccaagcctttcatcacttaccacaatgagctggacatg
aatttatatatgagaattgctccggaactgtaccataagatgctggtggtcggtggcatt
gaccgggtttatgaaattggacgccagttccggaatgaagggattgatttgactcacaat
cctgagttcaccacctgtgagttctacatggcatatgcagactatcatgatctcatggaa
atcacagagaagatggtttcaggaatggtgaagaacattacaggcaattacaagatcacc
taccacccagatggtcccgagggccaagcctatgagattgacttcactccacctttccgg
agaatcagcatggtagaagagcttgagaaagctctaggggtgaagctgccagaaactaac
ctctttgaaactgaagaaactcgcaaaattcttgatgatatctgtgtggcaaaagccgtc
gaatgccctccacctcggaccacagccaggctccttgataagcttgttggggagttcctg
gaagtgacatgcatcaatcctacgttcatctgtgatcacccgcagataatgagccctttg
gctaaatggcaccgctctaaagagggtttgaccgaacgctttgagctatttgtcatgaag
aaggaaatatgcaatgcctacactgagctgaatgatcccatgaggcagcggcagctgttt
gaagaacaggccaaggccaaggctgctggtgatgatgaggccatgttcatagatgaaaac
ttctgcactgccctggaatatgggctgcctcccacagctggctggggcatgggcattgac
cgcatcaccatgtttctcacagattccaataacatcaaggaggtacttctgtttcctgcc
atgaagcctgaagacaagaaggacactgtagcaaccactgatagaccagaaagcacaacc
gttggcacttctgtctag
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