Sciurus carolinensis (gray squirrel): 124966829
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Entry
124966829 CDS
T08117
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124966829
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124966829
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CAF1C_H4-bd
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_RFWD3
WDR90_beta-prop_4th
Voldacs
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
124966829
NCBI-ProteinID:
XP_047384518
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Position
16:57466207..57472075
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AA seq
445 aa
AA seq
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MAARKGRRRTCETAEPMDAESRDAGSEGPPQVYLPGRGPPLREGEELVMDEEAYVLYHRA
QTGAPCLSFDIVRDHLGDNRTELPLTLYLCAGTQAESAQSNRLMILRMHNLHGTRSPSSE
DSDDDEEEDEEDEEERKPQLELAMVPHYGGINRVRVSWLGEEPVAAVWSEKGQVEVFALR
RLLQVVDDPQAMAVFLRDEQARVKPIFTFAGHMGEGFALDWSSRVPGRLLTGDCQKNIHL
WTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACML
TTATAHDGDVNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPAATFKQHVAPVTSVEW
HPQDSGVFAASGADNQITQWDLAVERDPEAGDTEADPGLASLPQQLLFVHQGETDLKELH
WHPQCPGVLVSTALSGFTVFRTISV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcaagggtaggcggcgcacgtgtgaaaccgcggaacccatggacgctgaa
tcccgagacgcaggttccgagggtccgccccaggtctacctgcccggccggggaccgccg
ctgcgcgaaggagaggagctggtcatggatgaggaggcctatgtgctgtaccaccgtgcg
cagactggcgctccttgtctcagcttcgacatagtccgagatcacctgggagacaaccga
acagaacttcctcttacactttatctgtgtgcggggacccaggcggagagcgcccagagc
aacagattgatgatacttcgaatgcacaatctgcatgggactagatccccatcctcagag
gacagtgatgatgatgaggaggaagatgaagaggatgaagaagagcggaaacctcagctg
gaactggccatggtgcctcactatggtggcatcaaccgagttcgggtgtcatggctgggt
gaggaacctgtggctgcggtgtggtcagagaagggccaggtggaggtgtttgcactgcgg
cggcttctgcaggtggtagatgacccccaggccatggcagtcttcctccgggatgagcag
gctcgagttaagcccattttcacctttgccggccacatgggtgagggctttgccctggac
tggtcttctcgggtacctggtcgcttgctgaccggtgactgtcagaagaatattcatctc
tggacacctacagatggtggttcctggcacgtggaccagcggccatttgtgggccacaca
cgctccgtggaggacctgcagtggtccccaactgaggatacagtatttgcctcctgctca
gctgatgcctccattcgcatttgggacatccgggctgcccctggcaaggcctgcatgctg
accacagccactgcccatgatggggatgtcaatgtcatcagctggagccgccgggagccc
tttctgctcagtggtggggatgatggggccctcaaggtctgggacctgcggcaattcaag
tccggctccccagcggccaccttcaagcagcatgtggcccctgtgacctccgtcgagtgg
cacccccaggacagtggggtcttcgcggcctcaggtgcagacaaccagatcacacagtgg
gacctggcggtggagcgggaccctgaggcaggcgacacggaggctgaccctgggctggcg
tccctcccccagcagctgctgttcgtgcaccagggggagacggacctgaaggagctgcac
tggcacccgcagtgccccggggtcctggtcagcactgctctgtctggcttcaccgtgttc
cgcaccatcagcgtctga
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