Sciurus carolinensis (gray squirrel): 124966881
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Entry
124966881 CDS
T08117
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124966881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124966881
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124966881
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124966881
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124966881
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124966881
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124966881
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124966881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
124966881
NCBI-ProteinID:
XP_047384648
LinkDB
All DBs
Position
1:complement(40273387..40308874)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFAAERGIKLHNGGGKPFQAQQQEPHSGTSQQRQTK
MIPHSLHEPDVNEQSSSKIMFKKKGGWKAGSDGTTQEIPKYITASTFAQARAAEISAMLK
AVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEMAQKEAEKAVHQKKEHSKNKCHK
ARRCHINRIQEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGEKPTVKSHRACYRAMTN
LCLLQDLSYYCCLELKGKEEEILKAVSQMCNLDTGLTFAAIHCLSGKRQGSLMLYRANKY
PREMLGPVTFIWKSERTPGNTSESRQLWIWLHPTLKQDILEEIKTACQCMEPVKSNICTP
NPLLIPSQEESQHELADDKIGKKRKRKDDGDNAKSIKKVIGDGTRDSCQPYSWISPTTGI
VISDLTMEMNRFRLIGPLSHCILTETLKVASVHNGEEDTEETPHRWWSDMCKNPDSVSLH
HRQEAVFELLGGITSPAEIPAGTILGLTVGDPRINLPPKRSRALSNPEKCQDNEKVRQLL
LEGVPVECTHSFIWNQDICKSVTENKISDQDLNRMRSELLVPGSQLVLGPHESKIPILLI
QQPGKVTGEERLGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKEAVVHSQYKRSPNIP
GDFPDCPAGALFAEEQAKNLLEKYKRRPPAKRPNYVKLGTLAPFCCPWEQLTRDWESRVQ
AQDVSSVASSPSGEEGDLKRHWMPPAPEKSHQSSDEVGTSVNDPGEPEVMDTDCQDQAGA
KMVMDQGAGENHVAATNSQFCVLRSRKLLKQLSAWCGPSVENSRVVRQAASRGQQELTTE
ARLSILDRFPRALVWVSLSLLRKGSPEPLTMICVPTEEDFLQLSQDHHYSGPQEARHSDP
FKSMILKQKEKKKMKRRQNRGLAASTGVAVGSPAAGQGALTRGLWSGPLPGVISHCSRVL
LGFVTQGDFSMAVGCGEALGFVSLTGLLDMLLSQPEAGRGLVLLRSAASLQYRFARIAIE
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgctaagaaaatgagaaaccagcccactaatgtg
actttatcctctggctttgcggctgagagaggtataaagctccataatggtggggggaaa
cctttccaagctcaacagcaagaacctcattctggaacttcacaacagcggcaaaccaag
atgatccctcattcactgcatgagcctgatgtgaatgagcagtcttcctccaaaatcatg
tttaaaaaaaagggaggctggaaagcaggttccgatggcactacccaagagatcccgaag
tatataaccgcttctacttttgctcaagcacgagctgctgaaatcagtgctatgttaaaa
gctgtgacccagaagtcttctaattcgctggttttccagactctgccacgacacatgaga
cgaagagccatgagccacaacgtcaaacgcctccctaggcggttacaggagatggcccag
aaagaggcagagaaggctgtacatcagaaaaaagaacattccaaaaataaatgccataag
gctcgaagatgtcacataaaccggatacaagaatttaatcgtagacaaaagaagaacata
tggttagaaactcacatctggcatgccaaacggtttcacatggtgaagaagtggggctac
tgccttggggagaagccaacagtcaagagccacagagcctgctaccgagccatgacaaac
ctttgcctcctccaggatttatcctactactgttgtttggagctgaagggcaaagaggaa
gaaatactaaaggcagtttctcaaatgtgtaacttagacacaggattgacatttgcagca
attcactgcttgtctggaaagcgccaagggagcctcatgctttaccgagcaaataagtat
cccagagaaatgcttgggcctgttacatttatttggaagtctgagaggacccctggcaac
acttctgagagcaggcagttgtggatctggcttcatccaactcttaagcaggatatctta
gaagaaataaaaacagcatgccagtgtatggaacctgtcaaatcaaatatctgcactcct
aacccacttctgataccatcccaagaagaaagtcaacatgaactggctgatgataaaatt
ggcaagaaaagaaaaaggaaagatgatggagataatgctaaatcaattaaaaaagtcatt
ggtgatggaaccagagattcatgtcaaccatattcttggatctctccaaccacaggtatt
gtgatcagtgatttgaccatggagatgaacagattccggctgatcggtcccctttctcac
tgtatcctaactgagacgctgaaagttgcttctgtacacaatggggaagaggacacagag
gagacacctcaccgttggtggagtgatatgtgtaaaaaccctgatagcgtttcccttcat
cacagacaagaagctgtttttgaattgttgggaggaataacatcaccggcagaaattcca
gcaggtactattctgggactgacagttggggatccacgaataaatttgcctccaaagcga
tccagagctttgtccaatccagaaaagtgccaagataatgagaaagttagacagctgctt
ctggagggtgtgcctgtggagtgtacgcatagctttatctggaaccaagatatctgtaag
agtgtcacagagaataaaatctcggatcaggatttgaaccggatgagaagtgaattgctg
gtgcctgggtcacagcttgttttaggtccccatgaatccaagatacctatccttttgatt
cagcagccaggaaaagtgactggtgaagagcgactgggctggggaagtggctgggatgtc
ctactccccaagggctggggcatggctttctggattccatttatttaccgaggtgcaaga
gttggaggattaaaagaggctgtggtgcactctcagtataaaaggtcacctaacatccca
ggtgacttcccagactgtcctgcaggggctctgtttgctgaagaacaagccaagaatctt
cttgaaaagtacaaaagacgccctcctgccaaacggcctaactatgttaaacttggcaca
ctggcacctttctgctgtccctgggagcagttaactcgggactgggagtccagagtacag
gcccaagatgtgtcttcagtagcatcatctccaagtggtgaggagggtgacctgaaaaga
cactggatgcctcctgctcctgaaaaatctcatcagtcatctgatgaagtgggcacatca
gtaaatgacccgggggagccagaagtcatggacacagactgtcaggaccaggcaggagct
aagatggtaatggaccagggtgctggtgagaaccatgttgctgccaccaatagtcaattc
tgcgttctcaggagtaggaaattattgaagcagctgtcagcctggtgtgggcccagtgtt
gagaatagtcgggtggtccggcaggctgccagcagaggccagcaagaattgaccacagag
gcccgcctgtccatcttggaccgctttcctagggccctggtatgggtcagcctgtccctg
ctcaggaagggcagcccagagccacttaccatgatctgtgtcccaaccgaggaggacttc
ctccaactcagccaggatcaccactactctgggcctcaggaagccagacacagcgaccca
ttcaagagcatgatcctgaaacagaaagagaagaagaaaatgaagaggaggcagaaccga
gggcttgctgcttccacgggtgtggcagtggggtcccctgctgctgggcagggagctctg
actcgggggttgtggtcaggtcccctcccgggtgtgatctcccactgctccagagtcctc
ctaggctttgtcacccagggagatttttccatggctgttggctgtggagaagccctgggg
ttcgtgagtctgacaggcttgctggacatgctgctcagccagcctgaggctggaaggggc
ttggtgctgctgaggtctgctgcctcgctgcagtaccgatttgccaggattgccattgag
gtgtga
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