Sciurus carolinensis (gray squirrel): 124966996
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Entry
124966996 CDS
T08117
Name
(RefSeq) transcription factor RelB isoform X1
KO
K09253
transcription factor RelB
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04064
NF-kappa B signaling pathway
ncar04380
Osteoclast differentiation
ncar04625
C-type lectin receptor signaling pathway
ncar05166
Human T-cell leukemia virus 1 infection
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124966996
04064 NF-kappa B signaling pathway
124966996
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124966996
09158 Development and regeneration
04380 Osteoclast differentiation
124966996
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124966996
05169 Epstein-Barr virus infection
124966996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124966996
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
124966996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RelB_transactiv
RHD_DNA_bind
RHD_dimer
RelB_leu_zip
Motif
Other DBs
NCBI-GeneID:
124966996
NCBI-ProteinID:
XP_047384864
EnsemblRapid:
ENSSCRG00010015909
LinkDB
All DBs
Position
16:52924143..52951561
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AA seq
530 aa
AA seq
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MTGDELEIIDEYIKENGFGLEGAPPGPGDGQPRLVSRGAASLSTVTLGSSAPATPPSWGC
ALGRLMPPAPGPGPRPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIEL
RDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGVCRVRLRPHVSPRHSFNNLGIQC
VRKKEIEAAIERKIQQGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGQMRRMDPVLS
EPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEGRADFS
QADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSYGVDK
KRKRGMPDVLGELNSSDPHGIESKRRKKKPAFLDHFLPSHGPGPFLPPSALLPDTDFFPG
TVSLPGLEPPCEPDLLDDSFAYDPTAPTFFTMLDLLPPAPPLVSAVATSGVAGAAVGEPP
GAEPLTLDSYSAPGPGDGGTASLVGSNMFPNQYREAAFGSGLLSPGPEAT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagatgaattggagatcatcgacgaatacatcaaggagaatggcttcggcctg
gagggggcgccgcccggccccggcgacggccagccgcgcctggtgtcccgcggggccgcc
tcgctgagcaccgtcaccctgggctcctcggcgcccgccacgccgccgtcctggggctgc
gccctgggccggctgatgccgcccgcgccgggcccgggcccgcggccgcacctggtcatc
acggagcagcccaagcagcgcggcatgcgcttccgctacgagtgcgagggccgctcggcc
ggcagcatcctgggcgagagcagcaccgaggccagcaagacgctgcccgccatcgagctc
cgggattgtggcgggctgcgggaggtggaggtgaccgcgtgcctggtgtggaaggactgg
ccccaccgagtgcacccgcacagcctggtggggaaggactgtacggacggcgtctgcagg
gtgcggctccggccccacgtcagcccccggcacagcttcaacaacctgggcattcagtgt
gtgaggaagaaggagatagaggctgccattgagcgcaagatccagcagggcatcgacccc
tacaatgccggctccctgaagaaccatcaggaggtggacatgaacgtcgtgaggatctgc
ttccaggcctcttaccgggaccagcagggacagatgcggcggatggaccctgtgctctct
gagcctgtctatgacaagaaatccacgaacacgtcagagctgcggatctgcaggatcaac
aaggagagcgggccgtgcacgggcggcgaggagctctacctgctgtgcgacaaggtgcag
aaagaggacatctcggtggtgttcagcacagcctcctgggagggccgggccgacttctcc
caggccgacgtgcaccgccagatcgccatcgtgttcaagacgccgccctacgaggacctg
gagatcgtggagcccgtgactgtcaatgtcttcctgcagcggctcacggacggggtctgc
agtgagccgctgcccttcacgtaccttcctcgggaccacgacagctacggcgtggacaag
aaacggaaacgggggatgcccgacgtcctcggcgagctgaacagctctgacccccatggc
atcgagagcaaacgacggaagaagaagccagccttcttggaccacttcctgcccagccac
ggcccaggcccgttcctcccaccctcagccctgctgccggacacagacttcttccccggt
accgtgtccctgcctggcctggagcctccctgcgagcccgacctccttgatgacagcttt
gcctatgaccccacggcccccacgtttttcaccatgctggacctgctgcccccagcgcca
ccactcgtcagtgctgttgccaccagcggggttgcaggggccgcggtcggggagccccct
ggcgccgagccgctgacgctggactcctactcagcccccggccccggggacggaggcacc
gccagcctcgtgggcagcaacatgtttcccaatcagtaccgagaggcagccttcgggagt
ggcctcctgtccccggggcctgaagccacgtag
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