Sciurus carolinensis (gray squirrel): 124967005
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Entry
124967005 CDS
T08117
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124967005
Membrane trafficking [BR:
ncar04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124967005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
HK97-gp10_like
Motif
Other DBs
NCBI-GeneID:
124967005
NCBI-ProteinID:
XP_047384877
LinkDB
All DBs
Position
16:complement(17696376..17709268)
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AA seq
1421 aa
AA seq
DB search
MAQTLDGISCELRGEITRFLWPKEAELLLKTWLPQESGERSHILALLRWRAYLLHTCLPL
RVDCTFSYLEVQAMALQETPPQVTFELESLPELVLEFPGVAALEQMAQHVAAAIKKVFPR
STLGKLFRKPTPPSMLARLERSSSPESTAPGSPCGGFLETYEALCDYNGFPFQEEIQWTE
AVCRHFLSIQDVDTIYHRQGCRHFNLGDFSHLGSRDLALSVAALSYNLWFRCLSCVDMKL
SLEVSEQILHMMSQSSHLEELVLETCGLRGDFVRRLAQALAGHSSSGLRELSLAGNLLDD
RGMAALSRHLEHRPGALKKLSLAQTGLTHRGMRALGRALAINAGFDSALTHLDLSGNPGA
LGASEDNGGLYSFLSRPNVLTFLNLAGTDTALDTLFAALSRGCCSSLNYLDASRNIFSRS
KSRAAPAALQLFLSRAGTLQHLGLAGCKLPPDALRALLDGLALNTHIRDLHLDLSACELR
SAGAQVIQDLVCDASAVSSLDLADNGFGSDMVTLVLAIGRSRSLRHVALGRNFNVRCRET
LDDVLHRIVQLMQDDDCPLQSLSVAESRLKLGASVLLRALGTDPNLTALDISGNAMGDAG
AKMLAKALRVNTRLRSVIWDRNHTSALGLLDVAQALEQNHSLKIMPLPLNDVAQAQRSRP
ELTARAVHQIQACLLRNNQANSASSDHASCLQTPGQISDHSEQEVNELCQSVQEHMELLG
CGAGPQGEAAVHQAEDAIQNANFSLSILPILYEAGKSPSYQWQLQQKLEGLLGQVGEVCR
QDIQDFTQATLDTTRSLCPRMLQGPDWREQLEGVLVGSRSLPELLPEQLLQDVFTRLRDM
RLSVIGTLADSIVTQALTGLSAAQDRLVESLAEQAPVAMPPALPALDGGTSCSLRPGELE
CLFFPEEEKEVEEEEEKDYCPSPKWPEPSHCFQLVPYDHSAAEEAEQEPELAAPGEDAEP
QAGPSARGSPSPAAPGPPAGPLPRMDLPPAGQPLRHPTRARPRPRRQHHHRPPPGGPQVP
PALPQEGNGLSARVDEGVEEFFSKRLIQQDRLWVPEEDLATEGGAAPVPRTLRKKLGTLF
AFKKPRSTRGPRPDLETSPGATARTRKTTLGDLLRTPARPGRGEDPSGVEGGTSSPDPAR
RSRPRYTRESKAYSMILLPAEEEATLGTRPDKRRPLERGDTELAPSFEQRVQVMLQRIGV
SRGSGGAEGKRKQSKDGEIKKAGSDGDIMDSSTETPPISIKSRTHSVSADPSCRPGPGSQ
GPECATWKTLGQQLNAELRGRGWGQQDGPGPPSPCPSPSPCRASPSPDSLGLPEDPCLGP
RNEDGQLRPRPLSAGRRAVSVHEDQLQAPAERPLRLQRSPVLKRRPKLEAPPIPKPRIWP
WNRASAPTAHRALQPEEEPTLPSHRPKRRRPQPLILSSLAA
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaccctcgacggcatatcttgtgagctgcgaggcgagatcaccagattcctg
tggcccaaggaggccgagctgctcctgaaaacctggctaccacaggagagtggggaacga
agtcatatcctggcactgctacgatggagggcctacctgctccacacctgcctccctctc
agggtggattgtacattcagctacctggaggtccaggccatggccctgcaagagacacct
cctcaggtcacctttgaactggaatcattgcctgagctggtcctggagtttcctggtgta
gctgccttggaacagatggcccagcatgtggctgcagccatcaagaaggtcttccctcgc
tccacccttgggaagctattccggaagcccacaccaccctccatgctggctcgcttggaa
agaagcagctccccagagtccactgcacctggcagcccctgtggtggcttcttggagaca
tatgaggctctgtgtgactacaatggcttcccttttcaagaagagattcagtggactgaa
gctgtttgtagacactttctttccatccaggatgtggacaccatctaccatcgtcagggg
tgccgccatttcaacctaggagacttcagccaccttggcagccgggacttggccttgagt
gtggctgccctgtcctacaacctgtggttccggtgtctctcctgtgtggacatgaagctg
agcctcgaggtctcagaacagattctgcacatgatgagtcagtcgtcccacctggaggag
ctggtgctggagacctgtggcctaaggggagactttgtccggcgactagcccaggcactg
gcaggacattcaagctctggacttcgggaactcagcttggcagggaacctgctggatgac
agaggcatggctgcactcagcagacacctagagcatcgtccaggagccctgaagaaactc
agcctagcacagacaggactaacacatcgaggaatgagggctctgggcagggcactggcc
atcaatgctggctttgattctgccctgacccacctggacctttctgggaatccgggggcc
ctgggggcctctgaagacaatgggggcctctacagtttcctgagccgtcctaatgttctg
acgttcctgaatcttgcaggcactgacaccgccctggacactctctttgcagcgctgtcc
cgaggctgctgctccagtctcaactaccttgacgcttcaaggaacatcttctcccgctcg
aagtcccgggccgcacctgctgcactgcagctcttcctgagccgtgctgggacactgcag
cacctgggcctggcgggctgcaagctgccaccggatgctctcagggcccttttagatggc
ctggcactcaatacacacatccgtgacctgcacctggacctcagcgcttgtgagctgcgc
tcggctggtgcccaggtgatacaagacttagtgtgtgatgccagcgctgtgagctccttg
gatctggcagataacggtttcggctcagacatggtgaccttggtgctggccattgggagg
agccggtccctaagacatgtggcacttggaaggaatttcaacgtccggtgcagggagacc
cttgatgatgtcctgcaccggattgtccagctcatgcaggatgacgactgtcctctgcag
tctctgtctgtggctgagtcaaggctaaagctaggcgccagcgtcctgctccgggccctg
ggcaccgatcctaacctgacagcactggatatcagtggcaatgccatgggggatgcgggt
gccaagatgctggccaaggcactacgagtcaacacaaggctccggtctgtgatctgggac
cggaaccacacatctgctctgggcttgctggacgtggcccaggccctggagcagaaccac
agcctgaagatcatgcctctgccactgaatgatgtggctcaggcgcagcggagccgccca
gaactaacagcacgtgcagtccaccagatccaagcctgtctcttgaggaataaccaggca
aattctgcctcttctgatcatgcatcctgccttcagacaccgggtcagatctcagaccac
tcagagcaggaagtgaacgaactgtgtcagtcagtgcaggagcacatggagctgttgggc
tgtggggctgggccccagggtgaagctgctgtgcaccaggctgaggatgccatccaaaac
gccaacttctctctcagtatactccccattctatatgaggctggaaagtccccaagctat
caatggcagctgcagcagaagctagagggactcttgggacaggtgggcgaagtctgccgc
caggatatccaggacttcactcaggctacactagatacaacaaggagcctctgtccacgg
atgctgcagggacctgactggagggagcagctagaaggggtccttgtaggctcaaggagc
ctaccagaactgctcccagagcagctgctgcaagatgtcttcactaggctcagggatatg
cggctgtcagtcataggtaccctggcagacagcattgtgactcaggctctgactggtcta
agtgcagcccaggatcgactggtggagagtctggctgagcaggcaccagtagcaatgccg
cctgccctaccagcactagatggaggtacatcctgctccctcaggcctggggaattagaa
tgtcttttcttccctgaggaagagaaggaagtggaggaagaggaggagaaggattactgc
ccttcaccaaaatggcctgaacccagtcactgttttcagctggttccctacgatcacagt
gctgctgaggaagcggagcaggagcccgagctggcggctccgggggaagatgcggagccg
caggccgggccgtctgcgcgtggctctccgagccccgccgcccccggacccccggccggc
cctctgcctcgtatggacctgccacccgctggacaacccctgcgccatccgacccgggcc
cggccgcggccacgccgccagcaccaccatcgcccgccgccggggggcccccaggtgcct
ccggccctgccacaagaagggaatgggctcagtgcccgcgtggatgagggtgtggaggag
ttcttctccaaaaggctgatccagcaggatcgtctttgggtccccgaggaggacctggcc
actgaggggggtgccgctcctgtaccccgtacacttcgaaagaagctgggcaccctcttt
gcctttaagaagcctcgttcaacacggggtccccggcctgatctagagaccagccctggg
gcaactgcccgtacccggaaaaccacacttggagacttgctgcggacaccagcccggcct
gggcgtggtgaagatcctagtggggttgaggggggcaccagcagccctgaccctgcccgc
aggagccggcctcgctacacacgggagagcaaggcctactcaatgatactgctgcctgct
gaggaggaggcaacactgggtaccagacctgacaagcggcggcccttggaacggggagac
acagagttggccccatcgtttgaacagcgggtacaagtgatgctgcagaggattggcgta
agccgaggcagtgggggtgccgaaggcaagaggaagcaaagcaaagatggtgagatcaag
aaagctggctcagatggtgacattatggacagttccacggagacccctcccatctccatc
aagtctcgtacccactctgtctctgctgacccctcatgcagacctggcccagggagtcag
gggcctgagtgtgccacctggaagacattgggacagcaattgaatgcagagctcagaggc
cgtggttggggccaacaggatggtccaggacccccctccccttgtcccagcccaagcccc
tgcagagccagcccctccccagatagcctgggccttccagaggacccttgcttgggcccc
aggaatgaagatggccagctgaggccgcggcctctctcggcagggcgacgagcagtgtct
gtgcatgaggaccagctccaggcccctgctgaacggcctctgaggcttcagcgctcccct
gtcctcaagcgcaggccaaaactcgaggcaccccccatccccaagcctaggatctggcct
tggaaccgagcctctgcccccacagcccacagagccctccagcccgaagaggagcccacc
ctccccagccacagaccaaagaggcggcggccccaacccctgatcctctcttctcttgcc
gcatga
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