Sciurus carolinensis (gray squirrel): 124967011
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Entry
124967011 CDS
T08117
Name
(RefSeq) centromere protein T-like isoform X1
KO
K11512
centromere protein T
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124967011
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
124967011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-T_N
CENP-T_C
CENP-S
Bromo_TP
Histone
CBFD_NFYB_HMF
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
124967011
NCBI-ProteinID:
XP_047384889
EnsemblRapid:
ENSSCRG00010021185
LinkDB
All DBs
Position
16:17537626..17542854
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AA seq
522 aa
AA seq
DB search
MADFYNSDSEPTTRTLLRRVLDTADSRTPRRLRSAGAGAQRALLETPSSRRLNSGTKTTA
KQHSHGARSIGRLAHFQVSGNLEEQTPRTLLKNILLTAPESSILMPETVVKPVPALQVVQ
PSRKESSRGSLELQLPEFEPPTTLAAGLPAPSRKKQRLRLSVFQQEVDQGLPHSQEHPGN
ADASSLTSSLNLSFATPLQPQSVKRPGLARRPPLRRAVDVGALLQDLRDDSLASAPSGDS
LKTPIATLPTDTVLEDTQPFSQPLVGCSPSVHHFLPHPFPTGTEDAERAMGHGTQSSGPG
LQNHMSGACVAAPSLSFLEPQPWSAAAPEIIEAEDSQGTVEAEEPEGSSEDENTSDRPAE
LAASTPEFLQAKQLHPIPETAPPPGVAVLSSETLEPASARLPRKPRTAGSRPRQDSYKAG
LNHYIKLFSFYAKMPMERKAFEMVEKCLDKYFQQLCNDLEVFAAHAGRKTVRPEDLELLM
RRQGLITDQVSLYVLVERHLPLEYRQLLIPCAFSGNSVFPAL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctacaactcggacagcgagcctaccacgcgcacgctactgcgccgagtg
ctggataccgcggattcgcgtaccccgcggcgtctccggagtgccggggctggtgcccag
agagccctacttgaaacaccttcctccaggaggctgaatagtggaacaaagacaactgcc
aaacagcattcccatggagccaggtctattggcagactggcccactttcaagtcagtggt
aatctagaggaacagacaccccggactctgctaaagaacatcctactaactgccccagaa
tcttccatcctgatgccagagacagtggtgaagccagtgccagcactgcaggtggtccaa
ccttccagaaaggaaagcagtcggggcagcctggagctacaacttcctgaatttgagccc
cccacaaccctggctgcaggtctgcctgcccctagcaggaagaagcagaggctgagattg
tcagtgtttcagcaggaagtggaccaggggctgcctcactcccaagagcatcctgggaat
gctgatgcctcatcccttaccagctccctcaacctgtcctttgccacacctcttcagcca
cagtcagtgaagaggcctggtttggctcgcagacctcccctccgccgggctgtagatgtg
ggtgccctgttacaggatctgcgagatgattccttggcctcagctccttcaggtgacagc
ctcaaaacccctattgcaactctgccaacggacactgttttggaagacacccagccattc
tcacagcccttggttggctgctcccccagtgtacatcactttctgccccatccctttcct
actggtactgaagatgctgagagggctatggggcacgggacacagagcagtggacctggg
ctacagaaccacatgagtggggcttgcgttgctgctccatctttatccttcttggagccg
caaccttggtctgctgctgctccagagataatagaagcagaggattcccagggaactgtg
gaggcagaggagccagaaggatcttcagaggatgagaacacctctgacaggccagcagaa
ttggcagccagcacccccgagttcctccaggccaagcaactgcatccgattcctgaaaca
gcccccccacctggtgttgcagtcttgtcttcagagactctggagcctgcatcagccaga
cttccccgcaaaccccgaactgctggctccaggccccgtcaagattcctacaaggctgga
ctgaaccactatataaaactctttagcttctatgctaagatgcccatggagaggaaggct
tttgaaatggtggagaagtgcctagacaagtatttccagcaactttgcaatgacctggag
gtatttgctgctcatgctggtcgcaagactgtgaggccagaagacctggaactgctgatg
cgacggcagggcctgatcactgaccaagtctcattgtacgtgcttgtggagcggcacctg
cccctggagtacaggcagctgctcatcccctgtgcattcagtggcaactctgtcttccct
gctctgtag
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