Sciurus carolinensis (gray squirrel): 124967059
Help
Entry
124967059 CDS
T08117
Name
(RefSeq) iroquois-class homeodomain protein IRX-3 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124967059
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124967059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
124967059
NCBI-ProteinID:
XP_047384965
LinkDB
All DBs
Position
16:29460516..29470465
Genome browser
AA seq
505 aa
AA seq
DB search
MSFPQLGYQYIRPLYPPERPGAAGGGSGSAGARGGPGAGASELTASGSLSNVLSSVYGAP
YAAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQHPAAATAFPHPHPAFYP
YGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA
NARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELVGEEED
TGGEGLADDDEDEEIDLENLDGAAAGPELALSGAARRDGDLGLGPISDSKNSDSEDSTEG
LEERPLPVLSLAPAPPPVSGTPPSPPSPPTGLDPCAPAPAPSSALQKPKIWSLAETATSP
DNPRRSPPGTGGSPPGAAVAPPALQLSPAAAAAAAAAHRLVSAPLGKFPAWTNRPFPGPP
PGARPHPLSLLGSAPQHLLGLPGAAGHPAAATAYARPTEPEGGTDRCSALEVEKKLLKTA
FQPVPRREYREEKSGSDQKETRKGS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtacatccgcccgctctacccgcccgagcgcccg
ggagctgcaggcggcggcagcggcagcgcgggggcccggggcggacccggcgcgggagcc
tcggagctgaccgcctctgggtccctatccaatgtgctctcgtccgtgtacggggcgccc
tacgctgcggccgctgcggctgccgccgccgcccaaggctacggcgccttcctgccctac
gccgcggagctgcccatcttcccgcagctgggcgcgcagtatgagctgaaggacagccct
ggggtgcagcatccggccgcggccacagcgtttccgcacccgcaccccgccttctatccg
tatggccagtaccagttcggggacccgtcccgtcccaagaacgctacccgagagagtact
agcacgcttaaggcctggctcaacgagcaccgcaaaaacccctaccccaccaagggcgag
aagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgcc
aatgcgcgccggcgtctcaagaaggagaacaagatgacttgggcaccccgcagtcgtacc
gatgaggagggcaatgcttacgggagcgagcgggaggaggaagacgaagaggaggacgag
gaagatggcaaacgcgagctggagctagaggaggaggagctcgtgggggaggaggaggac
acggggggcgagggcctggcagacgacgatgaagacgaggagatcgatttggagaactta
gacggcgcggctgctgggcctgaactggccctgtctggggcagcgcgcagggacggtgac
ctaggcctgggacccatttcggactccaaaaatagcgactcagaagacagcaccgagggc
ttggaggagcggccacttccagtcctgagtctggccccagcgccaccgccagtgtctggg
actccaccatctcctccctcgcctcccacaggcctagacccctgcgctccggcaccggct
ccctcgtctgccctgcagaagcccaaaatctggtccctggccgagacggccactagcccg
gacaacccgcgccgctcgcctcctggcacgggaggttctcctcctggggcagccgtcgca
cccccggctctgcagctttctcccgcagcagccgctgccgcggccgcggctcacagactg
gtctcggcgccactgggcaaattccccgcttggaccaaccggccgttcccaggcccgccg
cccggcgcacgcccgcaccctctctccctgctcggttcggcccctcagcacctgctggga
cttcccggagccgctggtcacccggctgccgccaccgcctacgctcgacccacggagccc
gagggcggaacagatcgctgtagtgccttggaagtggagaaaaagttactcaagacagct
ttccagccggtgcccaggcgggaatacagggaggaaaaatcagggtccgatcaaaaggag
acaagaaaggggagctag
DBGET
integrated database retrieval system
