Sciurus carolinensis (gray squirrel): 124967141
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Entry
124967141 CDS
T08117
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124967141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124967141
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124967141
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Peptidase_S66
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124967141
NCBI-ProteinID:
XP_047385153
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Position
16:63979005..63992308
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AA seq
499 aa
AA seq
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MSLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSGDSVKSIAKLWDSKMF
AEIMMKIEEYISKQARASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSK
RFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLS
EEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTN
LSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCT
LAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYR
KMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARI
SKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYF
SSMAEFLKVKGEKSGIMST
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagatgaactgttggctgatcttgaggaggcagcggaagaggaggaaggg
ggaagctatggagaggaagaggaggagccagccattgaggatgtacaggaggagacccag
ctggatctttctggggactcagtcaaaagtatcgccaagctatgggacagcaagatgttt
gctgagatcatgatgaagattgaggagtatatcagcaagcaggccagagcttcagaagtg
atgggaccagtggaggccgcccctgagtaccgtgtcattgtggatgccaacaacctgacc
gtggagattgagaatgagctgaacatcatccataagttcatccgcgataagtactcaaag
agattccctgaactggagtccttggtccccaatgcactggactacatccgcaccgtcaag
gagctgggcaacagcctggacaagtgcaagaacaatgagaacctgcagcagatcctgacc
aatgccaccatcatggttgtcagtgtcaccgcctccaccacccaggggcagcagctgtca
gaggaggagctggagcggctggaggaggcctgcgacatggcgctggagctgaacgcctcc
aagcaccgcatctatgagtacgtggagtcccgcatgtcctttatcgcacccaacctatcc
atcatcattggagcgtccacagccgccaagatcatgggtgtggctggcggcttgaccaac
ctctccaagatgcccgcctgcaacatcatgctgcttggggcccagcgcaagacgctgtcc
ggcttctcatctacctcagtgctgccccacaccggctacatctaccacagcgacattgtg
cagtccctgcccccggatctccggcggaaagcagcccgtctggtggccgccaagtgcaca
ctggcagcccgtgtggacagtttccatgagagcaccgaggggaaggtgggctatgagctg
aaggacgagattgagcgcaagtttgacaagtggcaggagccgccgcccgtgaagcaggtg
aagcccttgcccgcacccctggacggacagcggaagaagcgaggtggccgcaggtaccgc
aagatgaaggagcggctggggctgacagagatccggaagcaggccaaccgcatgagtttt
ggggagatcgaggaggatgcctaccaggaagacctaggctttagcctgggccacctgggt
aagtcaggtagtggccgtgtgcggcagacacaggtaaatgaggccaccaaagccaggatt
tccaagacactacagcgaaccctgcagaagcaaagcgttgtgtatggtgggaagtccaca
atccgcgaccgctcctctgggactgcctccagcgtggccttcacccctctccagggtctg
gagatcgtgaacccacaagcagctgagaagaaggtggccgaggccaaccagaagtatttc
tctagcatggccgagttcctcaaggtcaagggtgagaagagcggcatcatgtccacctga
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