Sciurus carolinensis (gray squirrel): 124967153
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Entry
124967153 CDS
T08117
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124967153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124967153
Spliceosome [BR:
ncar03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
124967153
Complex B
124967153
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Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
124967153
NCBI-ProteinID:
XP_047385178
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All DBs
Position
16:57946641..57965435
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AA seq
469 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA
ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE
RRERSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERAR
RERERKEELRGGGGGGGGGGGGGSSGGGGGSGGGGGSGGGGGGGGGGDMAEPSEAGDAPP
DDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDREHKRGERGGERGR
DEARGGGGGGQDNGLEGLGNDSRDMYMESEGGDGYLAPENGYLMEAAPE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcctgccgcccaaccttctggccctctttgccccccgtgaccccatccca
tatctgccacccctggagaagctaccacatgagaaacaccacaatcagccttactgtggc
attgcaccatacatccgagagtttgaggaccctagagatgcccctcctccaactcgtgca
gaaacccgggaggaacgcatggagaggaagagaagggaaaagattgagcggcgacagcag
gaagtggagacagagctaaaaatgtgggaccctcacaatgatcccaatgctcagggtgat
gccttcaagactctcttcgtggctagagtgaactatgacacaacagaatccaagcttcga
agagagtttgaggtgtatggacccatcaaaagaatacacatggtctacagtaagcggtca
ggaaagcccagaggctatgccttcatcgagtatgagcatgagcgagacatgcattccgct
tacaaacacgcagatggcaagaagattgatggcaggagagtccttgtggacgtggagagg
ggccgaactgtgaagggctggaggccccggcggctaggtggtggccttggtggtacccgc
agaggtggggctgatgtgaatatccggcattcaggccgcgatgatacatcccgctatgat
gagaggcccggcccctccccgcttccccacagggaccgggaccgggaccgcgagcgggag
cgcagagagcggagtcgggagagagacaaggaacgggaacggcgacgctcccgctctcgg
gaccggcggaggcgctcacggagtcgagacaaggatgagcggcggcgctccagggagcgg
agcaaggacaaggaccgggatcgaaagcggcgaagcagccggagccgggagcgggcacgt
cgggaacgcgagcgcaaggaggagctgcgcggtggtggtggtggtggtggcggcggtggt
ggtggtggtagcagcggcggcggcggtggcagtggaggtggcggcggcagtggtggtggc
ggtggtggcggcggcggcggcgacatggctgagccctctgaggctggtgatgcacctcct
gatgatgggcctcctggagagcttggtcctgatggccctgatggtccagaggagaaaggc
cgtgatcgtgaccgggaaagacgtcggagccaccgtagtgagcgggagcggcgcagggac
agggaccgtgaccgggatcgcgaacacaagcggggggagcggggtggggagcggggcagg
gatgaagctcgaggaggagggggtggcggccaggacaacgggctggagggtctgggcaat
gacagccgagacatgtacatggagtctgagggtggtgacgggtaccttgctccagagaac
gggtatttgatggaggccgcacctgagtga
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integrated database retrieval system
