Sciurus carolinensis (gray squirrel): 124967173
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Entry
124967173 CDS
T08117
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124967173
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124967173
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124967173
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
MKS complex
124967173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
124967173
NCBI-ProteinID:
XP_047385218
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Position
16:29969553..30074824
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AA seq
1274 aa
AA seq
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MSGPTDETAGDLPVKDIGLNLFGAGGLQETSTTRTMKSRQAVSRVSREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMIEQLQEKVH
ELERQNEALKNKLISAKQHLQIQGYRQTPYNYVQSRINTGRRKANENAGLQECPRKGIRF
QDVDVAETVQPLLTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKE
NEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQEKQKTLR
ISHDALMANGDELNMQLKEQRLKCCSLEKQLHSMTFSERRIEELQDRINDLEKERELLKE
NYDKLYNSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKL
VQENRGLQLQCLEQKQQLDELKNHMKFFNQESEINADELSEALLLLKAQKEQKNGDLSFL
EKVDSKINKDLERSIKELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTHKMESL
QQDYEIKVEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHL
ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPIVQGLHPEYNFTSQ
YLVHVNDLFLHYIQKNTVTLEVHQAYSTDYETLAACQLRFHEILEKSGRIFCTASLVGTK
GDIPNFGTVDYWFQLRVPMDQAIRLYRERAKALGYITSNFKGPEQMQSLSQQVPKTAQLS
SPDSTDGNLNELHITIRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDD
HMCFPVPMNMDLDRYLKSESLSFYVFDDSDTQENIYIGKVNVPLISLAHDRCISGIFELL
DHQKHPAGTIHVTLKWKYTYFPPSGSITTEAEGNFIHREPEVVQTLPPTSSVSTSVVAPT
PKPRRLTPVDKKVSFVDTMPHRNPETSPPEDMKEISPEVEHTAETEINTRTISHIPKQVS
QESSIVKVKENTEIIQQGKDDDVSLLSEGQLAEQSLASSEDETEITEELEPEDEEDRSAS
DSDDCIIPGPISNNIKQPSEKIRIEIIALKLNDSRITTDDTIQRLFIECRFYSLPAEETP
VSLPKPKSGQWVYYNYSNVIYVDEENNQAKRDILKAILQKQEMPNRSLRFTVVTDPPEDE
QDLECEDIGVAHVDLADMFQRGRDIIEQNIDVFDARADGKGIGKLKVTVEAVHALQSVYE
QHKGPAPEASPTSE
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccaactgatgagactgcgggagacctgcctgtgaaagatataggtctaaac
ctctttggagcaggagggttacaagaaacttcaacaacacggacaatgaagtctcgccaa
gctgtatcacgtgtcagtcgtgaagaactggaagacagatttttgcgtttgcatgatgag
aacattttacttaaacagcatgcccgtaagcaagaggataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgagcgggttggtggcggccccaag
cggctgggacgagatgtggagatggaagaaatgattgagcagctgcaagagaaagttcat
gagcttgaaagacaaaatgaagccctcaaaaacaaactaatttcagccaaacagcacctt
caaatccaaggttacaggcaaacgccatacaattatgtacaatctcgtattaacactggg
cgtagaaaagcaaatgaaaatgcaggcttacaggaatgccccaggaaaggtataagattc
caagatgtagatgtagcagaaactgtacaacctctgcttacaaaatatggtaatagttta
cttgaagaagccagaggagaaataagaaatttagaaaatgttattcagtcacaaagaggc
cagatagaagagttagagcacttggccgagatcctgaaaactcagttgaggaggaaagaa
aatgaaattgagttatctcttcttcagcttcgtgaacagcaagctacagatcaaaggtca
aatattcgagataatgtagaaatgattaagcttcataaacaattggtggagaaaagcaat
gctctttcagtaatggaaggaaagtttattcagcttcaagagaagcaaaaaactctcagg
atcagccatgatgccttgatggcaaatggagatgagctaaatatgcaactcaaagagcag
cgtttaaaatgctgcagccttgaaaaacagttacattccatgacattttctgaaagaaga
atagaagagctgcaggatagaattaatgatttagaaaaggaacgggaacttttaaaggaa
aactatgataaactttataacagtgccttcagtgctgcccatgaagagcaatggaagtta
aaggaacagcagctgaaagtacagattgctcagctcgagactgccttaaaatctgattta
acagacaaaactgaaatccttgacagattaaaaactgaaagagaccaaaatgagaaactc
gttcaagagaatagaggacttcagttacagtgtctggaacaaaagcaacaacttgatgaa
cttaaaaaccacatgaagtttttcaaccaggagagtgaaattaatgctgatgaactgagt
gaagctctcctgcttctcaaggctcaaaaagaacaaaaaaatggagatctttcattttta
gagaaagtagacagtaaaattaataaagacctagaacgttccataaaagagctgcaagca
actcatgcagaaacagtgcaagaactcgaaaaaacaagaaacatgctaatcatgcaacat
aaaattaataaagattatcagatggaagttgaggcagtgacccataagatggaaagtttg
caacaagattatgaaattaaagtggaacaatatgttcatcttcttgatatcagggctgca
cgcatccagaaactagaagcccaattaaaggatattgcctatggcacaaaacagtacaaa
tttaaaccagaaatcatgccagatgactctgtcgatgaatttgatgaaaccatccaccta
gaaagaggtgaaaatctatttgaaatccacatcaacaaagtaaccttttcttctgaagtt
ttacaggcatctggagataaagagcctgtcactttctgtacctatgccttctatgatttt
gaactacagacaactcccatagttcaaggccttcacccagaatataacttcacttctcaa
tatcttgttcatgttaatgacttatttttacattatattcagaagaatactgtcacactt
gaagttcaccaagcttacagcacagattatgaaacacttgcagcatgtcaattgagattt
catgaaattctagaaaaaagcggtcgtatattttgcacagcaagtttagttggaactaaa
ggagacatcccaaattttggcacagtagattactggttccaattaagagttcccatggat
caagcaattcgactttatcgagaacgggcaaaggctttgggatatatcacatcaaatttt
aaggggccagagcaaatgcaatcgttaagtcagcaagtacccaaaactgctcagctcagt
tcaccagattccacagatggcaacttaaatgaacttcacattacaataagatgttgcaac
cacctgcagtccagagcaagtcacctgcagccacacccatatgttgtgtacaagtttttt
gattttgcagaccatgatacagccatcattcccagtagcaatgatccacagtttgatgat
catatgtgtttcccagtgccaatgaatatggatttggatcgataccttaagtcagagtct
ctgagtttttatgtgtttgacgatagtgatacccaggagaatatttacataggaaaagtc
aatgtgcctctgatttcattggcacatgacaggtgtatttcaggaatatttgagttacta
gatcatcaaaagcatcctgcaggcactatccatgttacattaaaatggaaatatacttat
tttccaccaagtggatcaataactactgaagctgaaggaaatttcatacacagagaacca
gaagttgttcagacactacctccaacatcctctgttagcacatcagttgtagcaccaaca
cctaaacctagacgtttaacacctgtagataagaaggtgtcttttgtggataccatgcca
catcggaatcctgagacttctcctcctgaagatatgaaggaaatttcaccagaagtggaa
catacagcagaaacagaaattaatacacgaactatttcacatattcccaagcaggtttct
caggaaagcagtatagttaaggtaaaagagaataccgagataattcagcaaggaaaagat
gatgatgtatctttactctccgagggtcagcttgcagaacaaagcttggcttcttctgag
gatgaaacagaaataacagaagaattggaaccagaagatgaagaggacagatcagcttct
gacagtgatgattgtattattccaggtcctatctccaataatatcaaacagccatcagag
aaaattcggattgagatcatagctctaaagcttaatgattctcgaatcactacagatgac
actatccaaaggctgttcattgagtgccgattctacagtctccctgctgaagagacacct
gtgtcacttccaaaacccaagagtgggcagtgggtctactataactatagcaatgtgatc
tacgtggatgaagaaaacaatcaagcaaagagagacatcttaaaagctatactacaaaaa
caagaaatgcctaatagaagtcttcgtttcactgtggtcaccgaccccccagaggacgag
caggatctagagtgtgaggacatcggcgttgctcacgttgatctcgctgacatgtttcag
agagggagagacatcatcgagcaaaatatcgatgtttttgatgcacgagcagatggtaaa
ggtattggcaagctcaaggtaacagttgaagctgtccatgccctacagtctgtctacgag
caacacaaaggacctgctccagaggcatctcctacttctgagtaa
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