Sciurus carolinensis (gray squirrel): 124967187
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Entry
124967187 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: metalloendopeptidase OMA1, mitochondrial-like
KO
K23010
metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124967187
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124967187
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M48: Ste24 endopeptidase family
124967187
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GFIT
Motif
Pfam:
Peptidase_M48
KPWE_dom
Motif
Other DBs
NCBI-GeneID:
124967187
NCBI-ProteinID:
XP_047385247
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Position
1:162375383..162436737
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AA seq
526 aa
AA seq
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MSFICGLRSATRNCFLSRFNSRDNWRKWNSPVVTLVGCCQVQNLQMLKKYQGLKSFSQCD
RWTFLPGNFHFCRTLNNRRTGYLSSAKSKKIRMVTHTCSAWNDSFPRWVLTKEVAVDLTL
GASSPLNCSSVRVGRSFHTSSRVQAAPVPLFLIILKPVQKLLAIIVGRGIRKWWQALPPN
KKEXIKASVRRNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLRKEHFRLLSEL
EYEAWMEEFKNDMLTEKDPRYLTVKEVVCHLIECNKDIPGISEINWVIHVVDSPDINAFV
LPNGQVFIFTGLLNSVTDMHQLSFLLGHEIAHAVLGHAAEKASLVHLLDFLGMIFLTMIW
AICPRDSLAILGQWIQSKLQEYMFDRPYSRTLEAEADQIGLELAAKACVDVRASSVFWQQ
MEFADSLHGHPKLPEWLSTHPSHGNRAEHLDKLIPQALKIREICNCPPLSGPDPRLLFKL
SMKHFLEESEKEDLNITVKKQKIDTLPIQKQEQIPLTYIVEKRTGS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagctttatctgtggactgcggtctgctactagaaactgttttctctcccgatttaat
tcacgggacaactggagaaaatggaattcaccagtagtaactttagtgggctgttgtcaa
gtacaaaatctccaaatgttaaagaagtatcaaggtcttaaatcattcagtcagtgcgac
aggtggacttttctccctggaaactttcatttctgtaggactttgaataacagaagaacg
ggatacctctcaagtgccaaaagtaagaaaattcggatggttactcacacctgttctgca
tggaatgactcttttcccagatgggtgcttacaaaagaagttgcagttgatcttactctt
ggagcctcaagtccactgaactgttcctctgtcagagttggcaggagtttccacacttct
tcacgggttcaagccgctccagttcctctcttcttgatcattctgaaaccagtgcagaag
ctacttgcaatcattgtgggcaggggcataaggaaatggtggcaagcacttcctcctaac
aagaaggaanctattaaagcgagtgtaaggaggaataaatggaagttattccttggtttg
agtagctttggactgctatttgtagtgttttactttactcacttggaagtgagcccaatc
acaggaagaagcaagctactattattgaggaaagagcatttcagacttctgtcagaactg
gaatatgaagcttggatggaagaatttaagaatgatatgctaactgagaaagaccctcga
tatctgactgttaaagaagtggtttgtcatctaattgaatgtaataaagatatcccaggg
atctctgagatcaattgggttattcatgtggttgattccccagatataaatgcctttgtg
cttccaaatggacaagtttttattttcactgggctcctaaatagtgtaactgatatgcat
caactttcctttcttctgggtcatgaaatagcacatgcagtacttgggcatgctgcagaa
aaggctagcttggttcatttactggatttcctaggtatgatatttctcacgatgatttgg
gccatttgtccacgagatagtttggcaattttgggccagtggatacagtctaaactgcag
gagtatatgtttgatagaccatacagtagaacattggaggctgaagctgatcaaattgga
ttagagcttgctgcaaaggcttgtgtggatgtaagagccagttcagtgttttggcagcag
atggaatttgcagatagcctccatggtcatcccaagttaccagaatggttatctacacac
ccttcgcatggaaatcgagctgaacacttggataagctcataccacaggctctcaaaatt
cgagagatctgtaattgcccgccgctttctggaccagaccctcgattactattcaaactc
agcatgaagcattttcttgaagaatcagaaaaagaggacctaaatatcactgttaagaaa
cagaaaatagatactcttccgatccaaaagcaggagcaaataccattaacatacatagtt
gagaaaagaactggcagttga
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