Sciurus carolinensis (gray squirrel): 124967256
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Entry
124967256 CDS
T08117
Name
(RefSeq) low-density lipoprotein receptor-related protein 3 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124967256
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124967256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
124967256
NCBI-ProteinID:
XP_047385324
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All DBs
Position
16:41365049..41379425
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AA seq
770 aa
AA seq
DB search
MEKRAATGPEGAPGARAQLAVVCLVNLFLTGKLSSAVPALAACSGKLEQHTERRGVIYSP
AWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLDWLLLGPAAPPRQEAFRLC
GSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKLGQVSCQPDEFRCDNGKCLP
GPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPVERRCDGTQDC
GDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSDLHCTWLVDTQDPRRVLLQLEL
RLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNA
TYQVKGYCLPWEQPCGSSSEGDDSGVGDQGCFSEPQRCDGWWHCASGRDEQGCPACPPDQ
YPCEGGSGLCYAPADRCNNQKSCPDGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDC
QDGSDEHGCLAAVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTQEYRAFETQMTRL
EAEFVRREAPPSYGQLIAQGLIPPVEDFPVYSASQASVLQNLRTAMRRQMRRHASRRGPS
RRRLGRLWNRLFHRPRAPRGQIPLLTAARTSQTVLGDGLLQPAPGAAPEPPASHTDTGSP
RAAGDAPPSAPGHAPEVGTSVPPPPAGLRDPEYGPVNKDRKACRDPLADNPAPSDTLPEP
CLAQDPYPPAPTASSTPDPHSPEPLEVCRSPPPPCSPTLEASDDEALLVC
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgggcggccacggggccggagggggcgccgggcgcccgggcgcagctcgct
gtcgtctgcctggtgaacctctttctcacggggaagctcagcagtgcagttcctgcccta
gctgcctgcagtgggaagctggagcagcatacagaacggcgcggcgtcatctacagccca
gcctggcccctcaactaccccccaggcaccaactgcagctggtacatccagggtgaccgt
ggggacatgatcaccatcagtttccgcaactttgatgtggaggagtcccaccagtgctcc
ctggactggctcctgttgggcccagcggccccgcctcgccaagaggccttccggctctgc
ggctctgccatcccgcccgccttcatctctgccagggaccacgtctggatcttcttccac
tcagacgcttctagctccggccaagcccagggtttccgcctctcctacatcagagggaag
ctgggccaggtgtcctgccagccagatgagttccgctgtgacaacggcaagtgcctcccg
ggcccgtggcagtgcaacaccgtggatgagtgtggcgacggatccgatgagggcaactgc
tctgcccccgcctctgagcctccaggcagcctgtgccctgggggcacctttccctgcagc
ggggcccggtccacgcgctgcctgcccgtggagcggcgctgcgacggcacacaggactgc
ggcgatggttccgatgaggctggctgccctgacctggcgtgcggccggcggctgggcagc
ttctatggctcctttgcctccccagacctgtttggggcggcccgtgggccctcggacctt
cactgcacgtggctggtggacacgcaggacccgcggcgcgtgctgctgcagctggagctg
cggctgggttatgacgactatgtgcaggtgtacgagggcctgggcgagcgcggggaccgc
ctgctgcagacgctttcctaccgcagcaaccaccggcccgtgagcctcgaggctgcgcag
ggccgcctcaccgtagcctaccacgcccgcgcccgcagcgctggccatggcttcaacgcc
acctaccaggtgaagggctactgcctcccgtgggagcagccttgcgggagcagcagcgag
ggggatgacagtggcgtcggtgaccagggttgcttctcagagccacagcgctgtgatggc
tggtggcactgtgccagcggccgggatgagcagggctgccctgcctgcccacccgaccaa
tacccctgcgagggcggcagtggcctgtgctatgcgcctgccgaccgctgcaacaaccag
aagagctgccccgatggcgccgacgagaagaactgcttctcctgccagcccggcaccttc
cactgcgggaccaacctgtgcatttttgagacatggcgctgtgacggccaggaggactgc
caggacggcagcgatgagcacggctgcctggccgctgtgccccgcaaggtcatcacagct
gccctcatcggcagcctggtgtgtggcctgctgctcgtcatcgccctgggctgcgccttc
aagctctactcgctgcgcacgcaggagtacagggcctttgagacccagatgacacgctta
gaggctgagtttgtgcggcgggaggcacccccctcctatggtcagctcattgcacagggc
ctcatcccacccgtggaggattttcctgtctacagtgcatcccaggcctcggtgctacag
aacctccgcacagccatgaggagacagatgcgacggcatgcttcccgccgggggccctcc
cgccgccgcctgggccgcctctggaaccgactttttcaccggccacgggcacctcggggc
cagattccactgctgaccgctgcacgtacctcgcagacggtgctgggcgatgggctcctc
cagcctgcaccaggggccgccccggagcccccagcatcccacacggacacaggcagcccc
agagcagctggggatgcgcctcccagtgcccctggccatgcaccagaggtgggaacttca
gtgccacccccacccgcgggcctgcgagacccagagtacgggcctgtgaacaaggacaga
aaggcctgtagggaccctctggcggataacccggccccttcggacacacttcctgagcct
tgcttggcccaggacccttaccccccggctcccactgccagcagcaccccagacccccac
tcaccagagccactggaggtctgcagaagccccccaccaccctgctccccaacattggag
gccagtgacgacgaggctttgctggtctgctga
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