Sciurus carolinensis (gray squirrel): 124967297
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Entry
124967297 CDS
T08117
Name
(RefSeq) sialic acid-binding Ig-like lectin 7 isoform X1
KO
K06740
sialic acid binding Ig-like lectin 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124967297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncar04090
]
124967297
04091 Lectins [BR:
ncar04091
]
124967297
CD molecules [BR:
ncar04090
]
Proteins
124967297
Lectins [BR:
ncar04091
]
I-type lectins (Siglecs)
124967297
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Ig_CD22
C2-set_2
SLAM
Motif
Other DBs
NCBI-GeneID:
124967297
NCBI-ProteinID:
XP_047385402
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Position
16:complement(59666292..59681807)
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AA seq
392 aa
AA seq
DB search
MLLLLLLLPLLRASERVEAGRDYPLLVQSPVTVQEGLCVHVPCRFFSSQKSSTAPARGYW
FPKGVKHRDAPVATNDPSREVREETRDRFQLLGDPGTDNCTLSIRDARKTDTGWYFFRVE
RKNFMYSYNKHHQVSVNVTALTHSPDILLPGTLEAGRPSNLTCSVPWACEQGTPPTFSWE
GTSVSSLGTSITHSSVLTLTPRPQDHGTNLTCQVTLPGAQVTRMKTVHLNISYSPQNLTV
IVSPGAGPASTTLENGSSLSVLEGQSLRLLCVVDSHPPARLSWSWGNLTLHPSQTLDPGV
LELSPSHLRGEGEFTCRAQNALGSQHISLSLSLQRKSRPVAQEVLGAIGVLAVKMVLLGL
CLVLLRVRSCRKRAARPGRPARGVERGDAVTG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctgctgctgctgcccctgctgcgggcgagtgagcgggtggaggccggg
agggattaccccctgctggtgcagagtccagtgactgtgcaggagggcctgtgtgtccat
gtgccctgccgattcttctcctcccagaagagtagcacggccccagctcgcggctactgg
ttcccgaaaggggtcaaacacagggatgctcctgtggccacgaatgaccccagcagggaa
gtgcgggaggagacccgggaccgattccaactcctcggggacccgggaaccgacaactgc
accctgagcatcagagacgccaggaagacggacacagggtggtacttctttcgggtggag
agaaaaaactttatgtacagttacaataagcaccaccaggtctcagtgaacgtcacagcc
ctgacccacagccccgacatcctcctccctgggaccctggaggctggccgtcccagcaac
ctgacctgctctgtgccctgggcctgtgagcaggggacgccccccaccttctcctgggag
gggacctctgtgtcctccctgggcaccagcatcacccactcctcggtgctcacactcacc
ccgcggccacaggaccacggcaccaacctcacctgccaggtgaccctgcctggggctcag
gtgaccagaatgaagaccgtccacctcaacatctcatactctccacagaacctgactgtc
attgtgtccccaggagctggcccagcatccacaaccctggagaatggctcatctctttcg
gtcctggagggtcaatctctgcgtctgctctgtgtcgtcgacagtcatccccctgccagg
ctgagctggtcctgggggaacctgactctgcatccctcgcagaccttggaccctggggtg
ctggagctgtccccatcccacctcaggggtgagggagaattcacctgccgcgctcagaac
gctctgggctcccagcacatctccctgagcctgtcgctgcagaggaagtcgaggcccgtg
gcccaggaggtcctgggggccatcggggtgctggctgtcaagatggtgctcctcggcctc
tgcctggtcttgctcagagtgaggtcctgcaggaagagggcagcgaggccagggaggcca
gcgaggggcgtggagcgtggagacgctgtcacgggttag
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