Sciurus carolinensis (gray squirrel): 124967384
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Entry
124967384 CDS
T08117
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124967384
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
124967384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
3keto-disac_hyd
FAM165
MAP17
Motif
Other DBs
NCBI-GeneID:
124967384
NCBI-ProteinID:
XP_047385583
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All DBs
Position
16:complement(10107804..10349763)
Genome browser
AA seq
1310 aa
AA seq
DB search
MNMGSAPGAVLKMLLLLSTHNWSRVEAGNSYDCDDPLVSALPQASFSSSSELSGSHGPGF
ARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEITSVATQGGYGSSNWVTSYLLMFSDSGR
NWKQYRQEDSMWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCA
YRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHRAGPSGDHITLELRR
GKLFLLINSGDAKLPSTHALINLTLGSLLDDQHWHSVVIQRLGKQVNFTVDEHRHRFHAQ
GEFNYLDLDYEISFGGIPAPEKSVSFQYKNFHGCLENLYYNGVDIIGLAKQQNPQIITMG
NVSFSCSQPQWMPLTFLSSRSYLALLASPREEEISASFQFRTWNKAGLLLFSELQLVSGG
LLLLLSDGKLKLNLLRQGKLPSDITAGVGMNDGQWHSISVSAKRNHLSVVVDGHVTTASL
LLGPEQLYSGGTYYFGGCPDKSFGSKCTSPVGGFQGCMRLISISNEVVDLISVQQGSLGN
FSDLQIDSCGISDRCLPNYCEHGGACSQSWSTFHCNCTDTGYTGATCHSSIYEQSCEAYK
HKGNTSGFYYIDSDGSGPLGPSLLYCNMTETAWTIIQHNGSDLTRVRNTDPENPHTGVFE
YVTGMEQLQATINRAEHCEQELAYYCKKSRLVNPQDGTPLSWWVGRTNETQTYWGGSLPD
PQKCACGLEGSCTDAQYHCNCDADRSEWTNDTGFLSYKEHLPVTKIVITDTGRPHSEAAY
RLGPLLCRGDRSFWNSASFNTEASYLHFPTFHGELSADVSFFFKTTALSGVFLENLGITD
FIRIELRSPTTVTFSFDVGNGPLEISVQSPTHFNDNQWHHVRVERNMKEASIQVDQLSPK
TQAAPTDGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMALDLEERAMVTPGVQPGC
RGHCGSYGKLCRNGGKCREKPSGFFCDCSSSAYTGPFCSHEISAYFGSGSSVIYNFQENY
SLSKNSSSHAASFHGDMKLSREMIKFSFRTTRAPSLLLYMSSFYKEYLSVIIAKNGSLQI
RYKLNRYQEPDVVNFDFKSMADGQLHHVKINREEGVVFVEIDENTRRQVLLASGTEFSAI
KSLVLGRILEHSDIDQETALAGAQGFTGCLSAVQLNHMAPLKAALHPSHPAPVTVTGHVT
ESSCVAPAGTDATSRERTHSFADHSGTKDDREPLTHAIKSDSAVIGGLIAVVIFILLCIA
AIAVRIYQQKRLYKRNEAKRSENVESAQDVLKSELNIQNTVNESQKEYFF
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggggtctgcccctggagccgtcctcaagatgctgcttctgttatctactcac
aattggagcagagtggaagctgggaattcttatgactgtgacgatcctcttgtgtccgcc
ttgcctcaggcatccttcagcagttcttctgagctctccggcagtcatggtcctggattt
gcaaggctaaatcgacgagatggagccggtgggtggtctccgctggtgtccaacaaatac
cagtggttgcagatcgaccttggagagagaatggagatcacctctgtggccacccaaggg
ggatatgggagctccaactgggtgaccagctacctcctgatgttcagcgacagtggcagg
aactggaaacagtaccgacaagaagacagcatgtgggggttttcaggaaatgcaaatgca
gacagcgtggtgtactacagactccagccttccatcaaagctaggtttctgcgcttcatc
cccctagaatggaaccccaagggcagaattggaatgcggatcgaggtgtttggatgtgca
taccgatcagaggtggttgatcttgatggaaaaagttcccttctctaccgatttgatcaa
aaatccctgagcccaataaaagatattatttctttgaaatttaaaaccatgcagagtgat
gggattctactccacagggcagggccaagtggagatcatatcacgctggagttaagaaga
ggaaaactctttttacttattaattcaggtgatgctaaacttccctccactcatgcactg
atcaatctcaccctgggcagcctgctggatgaccagcattggcattctgtggtcatccag
cgtttgggcaaacaggtcaactttacagtggacgagcacaggcatcgtttccatgcacag
ggagaattcaattacctggatcttgattatgagatcagctttggagggattccagcacct
gaaaaatcagtgtcattccaatataaaaattttcatggatgtttagaaaatctctactat
aatggagttgacatcattggtttggccaaacaacaaaacccgcagatcatcaccatggga
aatgtgtcgttttcttgttcacaaccacagtggatgcctctgacttttctgagctccagg
agttacttagctctgctggcttctcccagagaggaggaaatttcagccagttttcaattt
cgaacctggaataaggctggacttctgctcttcagtgaacttcagctggtttcagggggt
ctcctcctcttgcttagtgatggaaaacttaagctgaatctcctccggcagggaaaatta
cccagtgacatcacagcaggtgttggaatgaacgatggccagtggcattccatctctgtg
tctgctaaaaggaaccacctgagtgtggtggtggacggccatgtgaccactgcttctctt
ttgcttgggcctgagcagctttattcaggaggcacctattattttggaggttgtcctgac
aaaagctttggatcgaaatgtacaagcccagttggtggatttcagggatgcatgagactc
atttctatcagcaacgaggtggtagatctgatttcagttcagcagggctcccttgggaac
ttcagtgaccttcagatagactcatgtggcatctcagataggtgtttgcccaactactgc
gagcacgggggcgcctgttcccagtcctggagcaccttccactgtaactgcaccgacacg
ggttacacgggagccacctgccacagctctatctatgagcagtcatgtgaagcctataaa
cacaaaggaaacacctcagggttttactatatagattcagatggaagtggtccactagga
ccatctcttctctactgcaatatgactgaaactgcatggaccatcatacagcacaacggc
tctgacttaacaagagtgagaaataccgacccagagaacccacacactggggttttcgag
tatgtgactggcatggagcaactccaggccaccattaaccgcgcggagcactgcgaacag
gagcttgcttactactgcaagaagtcacggcttgtcaatccacaagacggaacccctctg
agttggtgggttggaagaaccaatgaaactcagacctactggggaggctctttgcctgat
cctcaaaagtgtgcctgtggcttggaagggagctgcacggatgcccagtatcactgcaac
tgtgacgctgaccgcagcgaatggaccaatgacacaggattcctttcctataaagaacat
ctgccggtaactaagatagtgatcacagacacaggtcggccgcattccgaagcagcttat
cgactggggcctctgctctgccggggagacaggtcattttggaattcagcttctttcaat
actgaggcctcataccttcattttcctactttccatggagaacttagtgccgatgtgtct
tttttttttaagacaacagctctatcgggggtgtttttagaaaacctgggaattactgat
ttcatacgaatagagctacgctctccaacaacagtgaccttttcatttgacgtgggcaat
gggcctctggaaatctcggtgcagtcacccacccacttcaatgacaaccagtggcaccat
gttagagtggaaaggaacatgaaagaggcctccattcaggtggaccagctgtcaccaaag
actcaggctgctccaactgatgggcatgtcctgttacagctcaacagtcagctcttcgtg
ggtgggacagccaccagacagaggggctttctgggatgcatccggtctctgcagttgaac
gggatggccctggatctggaagaaagggccatggtgactcccggggtgcagcctgggtgt
cgaggacattgtggcagctacggaaagttatgtcgcaatggagggaagtgcagggagaag
cccagtgggttcttctgtgactgctcttcctctgcctacaccgggccattctgttcccac
gagatttctgcatattttggatctggctcatctgtgatttacaattttcaagaaaattat
tccttaagtaaaaactccagctcccacgctgcttcatttcatggtgatatgaagctgagc
agagaaatgatcaaattcagcttccgaacaacacgggcacccagcttactgctttatatg
agctccttctacaaagaatacctttcagttatcattgccaaaaatggaagtttgcagata
aggtacaagctaaatagatatcaggaacctgatgttgttaactttgattttaaaagcatg
gctgatgggcaacttcaccacgtaaagattaacagagaagaaggagtggtctttgtagag
attgatgagaatacaaggagacaggtcctcctggcgtcaggcacagaattcagtgccatc
aagtctctggtactgggcaggatcttagaacacagtgacatagaccaggagacagcactg
gctggtgcacagggcttcacgggctgcctgtctgcagtgcagctcaatcacatggcccct
ctgaaggccgccctgcaccccagccacccggcccccgtcaccgttacggggcacgtgact
gagtccagctgtgtggctcccgctggcaccgatgccacctcgagggaaaggacgcactca
tttgcagatcattctggaacaaaggatgacagagaacccctcactcatgcaatcaaaagt
gactctgcagtaattggaggtttgatagcggttgtgatctttatcttgctctgcatcgct
gccatagctgtgcgcatttatcagcagaaaaggttatacaagagaaacgaggcgaaaagg
tcagagaacgtggagagcgcccaggacgtgttgaaaagcgagcttaatatacaaaacaca
gtcaatgaaagtcagaaagagtacttcttctga
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