Sciurus carolinensis (gray squirrel): 124967396
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Entry
124967396 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124967396
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124967396
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124967396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
zf-RING_UBOX
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR3_1st
zf-C3HC4_2
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EML
zf-RING_5
Beta-prop_WDR3_2nd
zf-rbx1
WD40_WDHD1_1st
CFAP43_N
Beta-prop_WDR75_1st
Rtf2
zf-RING_11
Nairovirus_Gn
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
zf-ANAPC11
zf-Nse
zf-UDP
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
124967396
NCBI-ProteinID:
XP_047385607
LinkDB
All DBs
Position
16:11610960..11650738
Genome browser
AA seq
849 aa
AA seq
DB search
MSRAREPDRVLPASVMAQEAMDYDLQVQLDRAPEQPAPIEVVSTQGRPPLLQPLPAEGVS
SQERPPLLQPVPAEGVSSQERPPLLHPVPAEGVSNQERPPLLQPIPVEGVSSQERPPLLQ
PVLTEVVNSQGRSPLLQPVPVEGVSSQGVLPLHQPTPQVSIDLTEEVELSEENVENINPG
ASEELRQGSGANRTLQASSLDSMNSFISGLQRLHGMLEFLRPPPSDQSVGPVRARRRRGS
TSRRARAGGSQRTESARLRAPLDAYFQVSRTQPHFPASSYDSETRNPVPEDLQVSSSSDS
ESESSAEYEEVVVQAEESEAIISEEQLGNVSTDQEVTFNSGGKTLPKQQSPQKSNPILPS
ASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISKWLKGQARKCPQCNKKAKH
NDIIVLYARTLRALDTSEQERMKSALLKEQMLRKQAELESAQCRLQLQVLTDECTKLHGR
VQDLQKLVQQPRGSQTSFLNCLPSSQGQHKYHFQKTFTVCQTGNCRIMAYCDAMSCLVIS
QPSPQASFLPGFGVKMLSTANMKSSQYIPMHGKQIRGLAFSSRSKGLLLSASLDSTIKLT
SLETNTVVQTYNAGRPVWSCCWCHDENNYIYAGLANGSILVYDLRNTSCHMQELVPQKAR
CPLVSLSYIPRAASAVFPYGGVLAGTLENASFWELKMGFSHWPHVLPLEPGGCVDFQTES
STRHCLVTYRPDKNHNTLRSVLMEMSYKLDDAGEPVCSCHPVQTFFGGPTCKLLTKSAIF
QSPENDGSILVCTGDEASNSALLWDAGSGLLLQDLQTDQPVLDICPFEVNHNSYLATLTE
KTVHFYKWE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggctcgtgagccagaccgcgtccttccggcttcagtgatggctcaagaagca
atggactatgatcttcaggtgcaattagatcgtgctcctgaacagcctgctcctattgaa
gttgtcagcacccaagggaggccacccctccttcaacctcttcctgctgaaggagttagc
agccaagaaagaccacccctgctccagcctgttcctgctgaaggagtcagcagccaagaa
agaccacccctgctccatcctgttcctgctgaaggagtcagcaaccaagaaagaccaccc
ctgcttcaacctattcctgttgaaggagtcagcagccaagaaagaccacccctcctccag
cctgttcttactgaagtagttaacagccaagggagatcacccctgctccaacctgttcct
gttgaaggagtcagcagccaaggggtactacccctacaccagcctactccacaggtgtcc
attgacctgacagaggaagtagagctctcagaagagaatgtggagaacatcaatcctgga
gcttcagaagaacttagacagggctctggtgctaaccgtactctccaagcatcttcattg
gattcaatgaacagcttcatcagtgggctgcagagacttcatggcatgctggaattcctg
agacctccaccttcagatcaaagtgtaggaccagtgagagcaaggaggaggagggggtcc
acttcccggagggcaagagctggaggatctcagaggaccgaaagtgccaggttgagagca
ccactggatgcttactttcaggtgagcaggacccagcctcactttccagcttcatcttat
gattcagagactaggaatcctgtgcctgaagacttacaggtatcaagcagttctgattct
gaaagtgagagctctgcagagtatgaagaggttgttgtccaggcagaggaatctgaagct
atcatttcagaagagcaactgggaaatgtctcaacagaccaagaagttacatttaacagt
ggaggcaagaccctccccaaacagcagtctccccaaaagtccaaccctattctaccttct
gcttctatggatgaagaagaaggggatacttgcacaatatgtttggaacagtggaccaat
gctggggaccaccggctctcagcattacgctgtgggcacctctttgggtataggtgcatt
tctaagtggctcaaaggacaagcacgaaaatgtccccagtgcaacaagaaagccaagcac
aatgacatcattgtcctttatgcccgaaccctcagagctttggacactagtgaacaggag
cgtatgaaaagtgccttactgaaggagcaaatgctgaggaagcaggcagaattagaatct
gcacagtgccgacttcaacttcaggttctcactgatgaatgcactaaacttcatggtcgt
gtccaggatttgcaaaaacttgtacagcaacccaggggctcccaaacaagtttcctaaac
tgcctgccctccagccagggccagcacaagtaccacttccaaaagaccttcacagtatgt
cagacaggaaactgccgaatcatggcatactgtgatgctatgagctgcctggtgatatca
caaccttctcctcaggcttccttccttccaggctttggtgttaagatgttgagtacggct
aacatgaaaagcagtcagtacattccgatgcatggcaaacagatccgtggactggctttt
agtagtcgttccaaaggcttgctgctttctgcttccctagacagtactattaaactgacc
agcctggagaccaatactgtggtccagacttacaatgctggacgtcctgtctggagctgt
tgctggtgtcatgatgaaaacaattacatctatgctgggctagccaatggttcaattcta
gtatatgacctgagaaacacaagttgtcatatgcaggagttagtacctcagaaagccaga
tgcccactggtatctctttcatatatacccagagctgcttctgctgtatttccatatggt
ggggtgcttgctggaacattggagaatgcttccttctgggagctaaaaatgggcttttct
cattggcctcatgtgctgcccttagagccagggggctgcgtagactttcagacagagagc
agcacccgacactgtcttgtgacctacaggcctgataaaaaccacaacaccctacgaagt
gtgctgatggagatgtcctataagctagatgatgctggagaaccagtttgctcctgccac
cctgtgcagacattcttcgggggacccacttgcaaactattgaccaaaagtgccattttt
caaagcccagagaatgatggcagcatcctggtgtgtactggggatgaagcatcaaactct
gctctgctgtgggatgctggcagtggcttattgctgcaggacctgcagactgatcagcct
gtcttggacatctgcccatttgaagtgaaccataacagctacttggccaccttaacagag
aagactgtccacttctataagtgggagtga
DBGET
integrated database retrieval system
