Sciurus carolinensis (gray squirrel): 124967429
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Entry
124967429 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 12B-like
KO
K24526
RNA-binding protein 12
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124967429
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124967429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
124967429
NCBI-ProteinID:
XP_047385675
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All DBs
Position
1:44270390..44281773
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AA seq
950 aa
AA seq
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MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRS
GGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGASGVGSLSNFIEAMKEEESNS
GYGSSMNQDAGFHTNGTGLDDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV
DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA
VKEDEVVIRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSIDKRDL
RNFFRDTDLTNEQIKFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHIDPVSR
KQMLKFIECYEKKRPEKEKPGHVSQKYSQESYSGQKLCIYIRNFPFDVTKVEVQKFFADF
SLAEDDIYLLFDDKGVGLGEALVKFKSEEQAIKAERLNRRRFLGTEVLLRLISEAQMQEF
GVNFSLKSSEKIQARSESHDRDDHSHLFDPKDPPIYSVGPSENFRYQLEDLRQLDNFKHP
QGYFRQPDRRPPEDFRHSPEDFRFPPEDFRHSPEGFRHPREEHFRRPPEEDFRRPREEDW
RRPLEEDWRWPPEEDFRRPPEEDFRRPWEEDFRCPVEEDFRRPREEDFRQPPEEDFRRPP
EEDFRHSPEEDFRRSPLEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHF
RRPPQEHFRRPPPEHFRRPPPEHFRRSREEDFRHMPDEDFRGPPNEDFRHPPDEDFRSPQ
EEDFRSPSDEDFRQLPEEDLREIPEEDPRLPDNFRPPGEDFRSPPDDFRSHRPFVNFGRP
EGGKFDFGKRNMGGFPEGRFMPDQKLNCGSGRVTPVKIMNLPFKANVNEILDFFHGYRII
PDSVSIQYNEQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcatccgtttactggggcttccttttattgcggggcctgtggatattcgt
cacttcttcacgggattgactattcctgatggaggagtgcatataattggaggggaagta
ggggaggcttttattatttttgcaacagatgaagatgcaagacgtgccataagtcgttca
ggagggtttatcaaggattcatctgtagagctctttcttagtagcaaggcagaaatgcag
aagactatagaaatgaaaagaactgatcgtgtaggaagagggcgaccaggatctggggca
tcaggggttggcagcctatcaaattttattgaggctatgaaggaagaagaaagtaattct
ggatatggctcttcaatgaatcaagatgctgggtttcatactaatggtacaggacttgat
gatttaaggccaagaaagacaaggccattgaaggccgagaatccatatttgtttctacga
ggtctgccttacttagtaaatgaagatgatgtacgtgtctttttctctggcttgtgtgtg
gatggagtgattttcttaaaacatcatgatggccgaaataatggtgatgccatagtaaaa
tttgcttcgtgtattgatgcttcaggaggtcttaagtgccatagaagttttatgggttca
agatttatagaagtaatgcagggctcagaacaacagtggattgagtttggtggtaatgca
gttaaggaggatgaagtcgtcataagatctgaagaacattctcctccaagaggaattaat
gatagacattttcgaaaacggtctcattcaaaatctcccagaagaacacgttctcgctcc
cctcttggattttatgttcacttaaaaaatctgtcgctaagtattgacaaaagagatttg
agaaatttctttagagacactgatctgactaatgaacagattaaatttttatataaagat
gaaagaagaacacgatatgcctttgtgatgttcaagactctgaaagactataatactgct
cttggtttacataagactgttttacagtatcgtccagttcatattgatccagtttctaga
aagcaaatgctgaagttcattgaatgctatgagaagaagagaccagagaaagagaagcct
ggacatgtttcacaaaaatattctcaagaaagctattctggccagaagctgtgtatatat
ataagaaattttccattcgatgttacaaaagttgaagtgcaaaagttctttgcagacttt
tctcttgcagaggatgacatttacttgctttttgatgacaaaggagttggtttgggagaa
gcactggtgaaatttaaatcagaagaacaggctattaaagctgaacgtttaaaccgaaga
agattcttagggaccgaggtattgttaagacttatatctgaggcacaaatgcaggagttt
ggtgtaaatttttccttgaagtccagtgagaaaatacaagcccgttcagagtcacatgat
agagatgaccattcccatttatttgacccaaaagacccacctatatactcagtgggccct
tctgaaaactttaggtatcagctagaggacttgaggcaactagataacttcaagcatccc
cagggatatttccgacagcctgataggcgccctccagaagacttcagacactctccagaa
gacttcagattccctccggaggacttcaggcactccccagagggctttaggcaccctcgg
gaagagcacttcaggcggcctcctgaggaagacttcaggcggcctcgggaggaagactgg
agacggcctcttgaggaagattggaggtggccaccggaggaggacttcaggcgcccacca
gaggaggacttcaggcgcccctgggaagaagacttcaggtgccccgtggaggaggacttc
aggcgtcctagggaagaggacttcaggcagccccctgaggaggacttcaggagaccccct
gaggaggatttcaggcattcccctgaggaggacttcaggcggtcacccctggagcacttc
agacgaccaccccaggagcacttcaggcgcccgccccaggagcacttcaggcgcccgccc
caggagcacttcaggcgcccgccccaggagcatttcaggcggccaccccaggagcacttt
aggcggccaccccaggagcacttcaggcggccacctccagagcatttcaggcggccaccc
ccagagcatttcaggcgctcccgagaggaagatttcaggcatatgccagacgaagacttc
aggggccctccaaatgaggactttaggcaccctcctgatgaggacttcaggagtccccag
gaagaagattttagatccccttccgatgaggatttcaggcagctcccggaggaagacctc
agagaaattccagaggaggatcctagacttcctgacaattttagacctcctggtgaggat
tttaggagcccacctgatgattttagaagtcatcgcccttttgtgaattttggtcgccca
gaaggtggcaaatttgattttggaaagcgtaatatgggaggttttcctgaagggagattt
atgcctgatcagaagttaaattgtggttcaggtagagtaactcctgttaagataatgaat
cttccatttaaagctaatgttaatgaaattttagactttttccatggttatagaatcata
cctgattcagtttcaatacagtataatgagcaaggattgcctacaggggaagccattgta
gctatgataaactataatgaagccatggctgctattaaagatctaaatgataggccagtt
ggcccccgcaaagttaagctaattttgctttag
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