Sciurus carolinensis (gray squirrel): 124967485
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Entry
124967485 CDS
T08117
Name
(RefSeq) Wilms tumor protein 1-interacting protein isoform X1
KO
K16682
LIM domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04390
Hippo signaling pathway
ncar04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
124967485
04392 Hippo signaling pathway - multiple species
124967485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124967485
03036 Chromosome and associated proteins [BR:
ncar03036
]
124967485
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124967485
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
124967485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
124967485
NCBI-ProteinID:
XP_047385771
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Position
16:42451872..42476500
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AA seq
439 aa
AA seq
DB search
MQRSRAAVDEAALLLAGLALRELEPGGDSPGRGRRGPRPGPGEEAAQALGRRGKGGGGPE
AGPDGLSRGERGPRRTVAPELSAQPAGSPRVSLAGSDGGGGGSARSSGISLGYDQRHGSP
RSGRSDLRPGPGPSSVGSARSSVSSLGSRGSAGAYADLLLPGSCLAPARSPEPAGPAPFP
LPSLQLPPGREGGPSAAERRLEALTRELERALEARTARDYFGICIKCGLGIYGARQACQA
MGSLYHTDCFICDSCGSPFPPLTLTGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCS
VCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVRDYHTVFAPKCA
SCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGLQLSGEDGRRCYPLEGHLLCRRCH
LRRLGHGPLPSPAVHVTEL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctcccgggcggccgtggacgaggcggccctactcctggctgggctggccctg
cgggagctggagccgggcggcgactctccgggccggggtcgacgggggccgcggcccggg
ccgggagaggaggcggcgcaggcactgggccgcagaggcaagggaggcggcggccccgag
gccgggccggacggactgagccgcggggagagaggcccgcggcgcacggtggctcccgag
cttagcgcgcagccggcgggcagcccgcgggtcagcctggcgggctccgacggtggcggc
ggcggtagcgcccgctccagcggaatcagcctgggctacgaccaacgccacggcagccca
cgctccggccgctccgacctgcgtccgggcccaggtccgtcgtcggtgggcagtgcccgc
tccagcgtgtccagtctcggctcccgcggctcggcgggcgcctacgccgacttgctcttg
cccggctcttgccttgcgccggctcgctccccggagcctgccgggccggcacccttccct
ctgccttctctgcagctgcccccgggccgagagggcggcccgagcgcggccgagcggcgg
ctggaggcgcttacccgagagctggagcgggcgctggaggcgcgcacggcgcgggactac
ttcggcatttgcatcaagtgtgggcttggcatctatggagcacggcaggcgtgccaggcg
atggggagcctgtaccacaccgactgcttcatctgtgactcctgcgggtcccccttcccg
cccctcaccctcacagggagacgacttcgagggaaggcgttctacaacgtgggagagaag
gtgtactgccaggaggacttcctgtactccgggttccagcaaacagctgacaagtgtagc
gtgtgtggacacctcatcatggagatgatcctgcaggccctgggcaagtcctatcacccc
ggctgcttccggtgctccgtgtgcaatgagtgcctggacggggtgcccttcaccgtggac
gtggagaacaacatctactgcgtcagggactatcacacggtttttgcaccaaaatgtgcc
tcctgtgcccgtcctatcctccctgcacagggctgcgagacgaccatccgtgtggtgtcc
atggacagagactaccacgtggaatgctaccactgcgaggactgcgggttgcagctgagt
ggggaggatggacgccgctgctatcccctggagggccaccttctatgtcgtcgctgccat
ctgcggcgcctcgggcatggcccacttccctcacccgctgtgcatgtcactgagctctga
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