KEGG   Sciurus carolinensis (gray squirrel): 124967498
Entry
124967498         CDS       T08117                                 
Name
(RefSeq) Fanconi anemia group A protein-like isoform X1
  KO
K10888  fanconi anemia group A protein
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124967498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124967498
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     124967498
SSDB
Motif
Pfam: Fanconi_A_N FANCA_arcN FANCA_CTD FANCA_helical
Other DBs
NCBI-GeneID: 124967498
NCBI-ProteinID: XP_047385808
LinkDB
Position
16:265636..322092
AA seq 1411 aa
MAGSPRRRRSWAELLAGRVKRQKHDPEREQKLQNSAVQLLRRHQSMRDLLLEIEDPPCEK
SCFSGLIDCDSDKAYTDGSHSFIGSAFRDQASKLGVPVGILSARTVACSVKLVCEEPSHP
VLLSTEQRKKLFSLLEIAQYLLQHSMFSRLSFCQEVWKAQNALLLETAWRLHVQSVVSLQ
ELLESHPDRRALAAWLFRNLCLLCQQIDASCPSLDVTRAMLSDFVELLVLWGFQENLDLR
RVAESGTMTQVAADVLRSMLSFALDALAAGLQEESSDHRVVSCWLGVFRALPCGRVSADA
LKRFLSHTLTQVLTHSPVLKASDAIQRQREWSFARTHPLLTVLYRRLLLMLSPEESVSRL
QEVLETHEVNWQRVLSCVSTLVVCFPEAAQLVQDWVARLMAHAFESYHLDSMVTAFLIVR
QAALEGPSAFPSYADWFKASFGSARGYHSCSKKALVFLFKFLSSLVPWEAPRYMQVHVLH
PPLVPGKFRALLADYVALARTRLADLKVSLENMGLYENLSSAGDVTEPCSQAAQDVEKAL
VVFEHTGRVPVPVMEASIFRRPYYLSHFLPALLTPRVLPAAPDSRVAFIEALKRADKIPQ
SLYAAYRQACCAAEKPPEGATSGTRAESTCAEEPIGPLRAALGELRALMADPTQCDAISA
QMALVSEGLRTALGHGEDGGPRGAGKVRLSVLAPGLQQPEQLVVDLLLTEFCQSLMVASS
SAPPERQGPWAALFVRTLCGPALLPVVLARLCQLLHQGPRLSAPHVLGLAALTVHLGEPG
SALPEVDPGPPAPAGGLPVPRFLDSLVTCHTKESSLFCLRFCTAAISYALSKFPPQPRGS
WYSCLSPGLVKKFQFLVFRLFSEARAPLPQGDAAGFPWGPVCPCPSDWKMAALALWRQGR
FQELLAEGFRLTFRDWLQLELDIQPGADALSDTERQDFHQWAIHEHYLPAPCASGGCDGD
LQEACTVLVNVLMDSYRSSRSWNHSESSSWVPGGCSGSGDLLSRLQEMILDLELEQGAAS
RGHFVFSVFYSRLQPLAGGAGVATSLQRQQELLACRWLLLRLPPSVLVGSLQAQRPAAAL
CEEFFHLVNSELRNFSQGGALTHDITIHFFRGLLNACARSHDPLLTASLTLTECQTKCPI
LLTSALAWWSSLEPVLHSRWRKCFQSPLPPELQRLQEAQQFASNFLAPGSTSPAPSPAWV
SAAALHFALKEVTTESIRQLKKLDCEREELLLPLFFFSLMDLLSSHLAQNDTADPLKAVN
TCAEVLACLQRRRVDWLVLFQLTETDADRGHLLRLAPDQLTRLLPFAFYSLLSHFKDDTV
TGEEAFLRVAVDMYLKLVHLFIDGETRAVSTPASRRLQLHDRSSPQPGNPVQLITEARLF
LLQLIPQCLKNSSSNMAEVTQDTLLGSDFTP
NT seq 4236 nt   +upstreamnt  +downstreamnt
atggcgggctcgccccgtcgccgtaggtcctgggccgagctgctggcgggaagggtcaag
aggcaaaagcatgatccggaaagggaacagaagttgcagaactcggccgtgcagcttctg
agacgccaccaaagcatgcgtgaccttttgctggagatagaagatccaccctgtgaaaaa
tcgtgcttcagcggattgattgattgtgacagtgacaaggcctacactgatggttctcat
tccttcataggctctgcttttcgggatcaggcctcaaagctgggggttcctgtggggatc
ctgtcagccaggacagttgcctgcagtgtcaagctggtctgtgaggagcccagccaccct
gtgctgctcagcacagagcaaagaaagaaactgttttccttgctggagattgctcagtat
ttactgcaacacagcatgttctctcgcctctccttctgtcaagaagtatggaaagcacag
aatgctctcttgcttgaaactgcgtggcgtcttcatgtgcaaagtgtcgtgagcctccaa
gagctgctggaaagccaccctgacaggcgggccttggcagcctggctcttcaggaacctg
tgcctcctgtgccagcagatagatgcctcctgcccatccctggatgtcaccagggctatg
ctgtccgattttgtggagctgctggttttgtggggatttcaggaaaacttggatctgaga
agagtggcagagtctggaacgatgacccaggtggctgccgacgtgctgcggagcatgctc
tcctttgcacttgacgctctggctgccggccttcaggaggagtcctcagatcacagggtg
gtgagctgctggcttggcgtgttccgggctctcccgtgtggcagggtttctgcagacgcg
ctgaagaggttcctcagccacactctgacccaggtcctcactcacagccctgtgctgaaa
gcatccgatgcaattcagaggcagcgagagtggagctttgccaggacccaccctctgctc
accgtgctgtaccgcaggctcctgttgatgctgagtccagaggagtcggtcagccgtttg
caggaggttctggagacgcatgaggtcaactggcagcgcgtgctctcctgtgtgtccacg
ctggtcgtctgcttcccagaggcagcgcagctggtgcaggactgggtggcccgtttgatg
gcccacgcctttgagagctaccacctggacagcatggtcaccgccttcctgatcgtgcgc
caggctgccctggagggcccctctgcgttcccgtcctacgcagactggttcaaggcctcc
tttggcagtgctcggggctaccacagctgcagcaagaaggcactggtcttccttttcaag
ttcctgtccagcctcgtgccctgggaagccccccggtacatgcaggtgcatgttctccac
ccgcccctggtgcctgggaagttccgcgccctcctcgctgactacgttgccctggctagg
acgcgactggctgacctcaaggtttctctggagaacatgggactctacgagaatttgtcc
tcagctggggacgtcacggagccctgcagccaggcagcccaggacgtggagaaggccctg
gtggtgtttgagcacacggggagggtcccggtccccgtcatggaggccagcattttcagg
agaccctactacctgtcccacttcctgcccgccctgctcacgccgcgagtgctcccagcg
gccccggattctcgagtggcttttatcgaagccctaaaacgagcggataaaatcccccag
tctctgtacgctgcctaccgccaggcctgctgcgctgccgagaagcccccagaaggtgca
acctcgggaacaagggcagagtccacctgtgccgaggagcccataggaccgctcagggcc
gcgctgggagagctcagagccttgatggcggaccctacccagtgtgatgccatatctgct
cagatggccctggtttctgaagggctgcgcacagccttggggcacggggaggatggcggc
ccccgtggggctgggaaggtccggctcagcgtccttgctccagggctccagcagcccgag
cagctggtggtggacctcctgctcacagagttctgtcagagcctgatggtggcctccagc
tctgcccctccagagaggcagggcccctgggcagccctcttcgtgaggacgctgtgtgga
ccagcgctgctccctgtggtccttgcccgcctctgccagctgctgcaccagggcccacgc
ctgagtgccccacatgtgctgggcttggctgccctgaccgtccacctgggtgagcctggg
tctgcgcttccggaggtggacccaggtcctcctgcccctgccggtggccttcctgtcccc
aggttcctcgacagcctcgtgacgtgccacaccaaggagtcctcgctcttctgcctgagg
ttctgcacggcggcgatctcttacgccctgagcaagttccctcctcagcctcgaggttcc
tggtacagctgtttgtctccaggtcttgtcaaaaagtttcagtttcttgtgttcagattg
ttctccgaggcccgagcacctctccctcaaggggacgcagcaggctttccctggggaccc
gtgtgcccttgcccctcagactggaagatggctgcacttgccctgtggagacagggccgc
ttccaggagctgcttgcagaggggtttcggctaaccttcagagactggctgcagctggaa
ctggacatccagcctggagctgatgccctgtcggacacagagaggcaggacttccaccag
tgggccatccacgagcactacctcccggcaccctgcgcttcaggcggctgtgacggagac
ctgcaggaggcctgcacggtgctggtcaacgtgctgatggactcctatcgaagctcaagg
agttggaaccactcggagagctccagctgggtccctggtggctgctcaggaagtggggat
cttctttccaggctgcaggagatgattctcgacctggaactggagcaaggcgcagcctct
cggggacactttgtattctcggtgttttacagccggctccagcctctggcgggtggggca
ggtgtggccaccagcctccagagacagcaggagctgcttgcatgcagatggctcctcctt
cgcctgcctccatctgtcctggtcggcagcctgcaggcccagcggcccgccgccgccctc
tgcgaggagttcttccacttggtcaactctgagctgagaaacttctcccagggaggtgcc
ctgacccacgacatcaccatccacttcttcagggggctcctgaatgcctgtgcacggagc
catgaccccttgctgacagccagcctgaccctgactgagtgccagaccaaatgccccatc
cttctgacctctgcactggcgtggtggtcaagcctggagcctgtgctgcacagtcggtgg
agaaaatgcttccagagcccgctgcctcctgaactgcagaggctgcaggaagcccagcag
tttgccagcaactttctggcccctggctcgacttcccctgcacccagccccgcctgggtc
tcggctgctgcgttgcactttgccctgaaagaagtcacgacagaaagcatcagacagctg
aagaagctggactgcgagagagaggagctgctgctccccctcttcttcttttccttgatg
gacctgctctcatcgcacctggcccaaaacgacacggcagaccccctgaaggctgtgaac
acctgtgctgaagtccttgcgtgtttgcagaggaggagggtggactggctggtgctcttc
cagttgacggagacagatgctgaccgagggcaccttctccgcctggccccagaccagctt
accaggctgttgccttttgccttctacagtcttctctctcacttcaaagacgacacggtc
acaggggaagaggcctttctgcgtgttgctgttgacatgtacctcaagctggtccacctt
ttcatagatggggagaccagggctgtatcaactccggccagcaggagactgcagctccat
gaccggtcctctccccagcctggcaaccctgtgcaactgataacagaagctcggcttttt
ctgctgcagttaatacctcagtgcctgaaaaacagctcctcaaacatggcagaggtaacc
caagacactcttcttgggtctgatttcacaccttag

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