Sciurus carolinensis (gray squirrel): 124967509
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Entry
124967509 CDS
T08117
Name
(RefSeq) soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like isoform X1
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124967509
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
124967509
NCBI-ProteinID:
XP_047385841
EnsemblRapid:
ENSSCRG00010025221
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All DBs
Position
16:65192206..65214842
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AA seq
1531 aa
AA seq
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MWVFAVGRFPPAASPFSPRLSWASPLPLLSPAASLQPLSWQSLQPGLLLCGSREPRRRVP
SSHACPPPPCPLPLHPSPALDSANMKVLACLLAALVGIQAVERLRLADGPHGCAGRLEVW
HGGRWGTVCDDGWDLRDAAVACRELGCGGALAAPGGAFFGEGAGPVWLSELACRGSEGQL
GLCPHRGWKAHICSHEEDAGVVCAGQRVATSRDDSASPPDGGPWLGLSGDLSPGSEDPPV
TQVPRPAGTLQSGPRKKSLRPPKPAKSTRAPLLTGAPRPERLRLVSGPHGCAGRLEVWHG
GRWGTVCDDGWDLRDAAVACRELGCGGALAAPGGSRFGPGAGPVWMDDVGCGGGEQALRD
CPRSPWGRSNCDHSEDAGLVCTGPAPRLRLADGPHGCAGRLEVWHGGRWGSVCDDAWDLR
DAAVACRELGCGGALAAPGGAFFGEGAGPIILDDLRCRGNETALRFCPARPWGQHDCHHR
EDAGAVCDGMPLGFVSPTAPAVDSNSSAPREAATSPLSTIMGQTLGTAGGSPPPASPTAP
WEPGPEAGSPGLRLVAGPSRCSGRLEVWHDGRWGTVCDDSWDTRDSAVVCRELGCGGPRQ
PDPAAGRFGWGAGPIWLDDVSCVGTEASLSDCPAAPWGKHNCAHNEDVGVTCTGTPGLDT
ISDPFSWSWLPGMGRDQDAWLPGELVTKPPVSLTSSVLEKTTKASGKMPKSTKKWVTKTT
KRPTTQPPGMSTTKPSRGLSTPNLSEPTSKTTILTTEASPKGTSEPKRLISEAPHRLTSH
TTTELTPQAPWEWTSKTVAMLSTQSPREITSEATVKQSPQVSLETSAEIPEGSPEPSKDS
VPSPTASSLGESGPFRVRLADGPNRCAGRLEVWHAGRWGTVCDDNWDLRDATVACWELGC
GKVRPRVGKTHYGPGTGPIWLDDMGCKGTESSLSDCPSRPWGNHNCDHEEDVGLTCTGYT
DDDDYPPWTWDPTSGEELAKGTTTAAGSEHMLSWGTTRRPGVPLPATQRLPDTGDQDGDK
PSRAQDVSSRRGPVKGTPASATPGPTLTTGTTKSPGQPSPAPGSSGDRGAPRKPWPERRP
SRPTAARTAASTSSASPSLAPGSSGPPPTPDSASTREATTDPAYTSPPTQAGPAWTAPDL
ALSTADSSSGPAGVPALSSTQSSTSPRELTSDPTAPSELTPVSDTTPDLETASYPQTAPE
PSGSPDPSTSPCPTAPTHPIMTPGATGTSHPNRTPRTTTDSITSLHPTTVPHPTMTPELT
VTPDPATAPHPATAQPTATILPSGTPDPTSTPGITAKTLATSLGTELPSPTLAPKVKPSL
HPQLTVVGTPQTPTFQVLNLDPSPASGSSPSRTSPVPNVGPLSTEDFQPPTGQTPRLTPP
PAHTPHSASDPTVTPDLHLPSVAHPLDQPPPDHLPPGPAPSQIPGSLDQCVSPVPPVRVM
ACEPPALVELVDAVRDVAGQLQRLTQVLEQDRQEHQVLGLGLARLVEAAQGLGQLGEAVK
NLAEVARPPSTPVPTTPTTPEEEERPLRGDV
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtttgcagttggacgcttccctcccgccgcctcccccttctccccacgcctc
agctgggccagccccctccccctcctgtcccctgccgcctccctgcagcctctctcctgg
caaagcctccagcctggcctactcctctgcgggtccagggagcctcgcaggcgcgtccct
tcctcccacgcctgccctcctcccccctgccctcttccccttcacccgtcccctgccctg
gactctgccaacatgaaggtcttggcctgtctccttgcagcactggtggggatccaggct
gttgagcggctgcgcctggctgatggtccccacggctgtgccggccgcctggaggtctgg
catggcgggcgctggggcaccgtgtgtgacgatggatgggaccttcgggatgctgctgtg
gcctgccgggagctgggctgcgggggggcgctggccgcccccgggggcgccttctttggg
gagggcgcagggcctgtgtggctcagcgagctggcctgccggggcagtgaggggcagctg
ggcctctgcccccaccggggctggaaggcccacatctgttctcatgaggaggacgccggc
gtcgtctgtgcaggccagcgagtggcgacctccagggacgactcagcatcacccccagat
gggggtccatggctggggctgtctggggacctgagccctggctctgaggacccccctgtg
actcaggtcccccgcccagctgggaccctccagagtggcccccggaagaaaagcctccgg
ccacccaagccggccaagtccacccgggctcctctgctgactggagccccacgtccagag
cgactgcgcctggtctcaggcccccacggctgtgccggccgcctggaggtctggcacggc
gggcgctggggcaccgtgtgtgacgatggatgggaccttcgggatgctgctgtggcctgc
cgggagctgggctgtgggggggcgctggctgctcctgggggttccagatttgggcctggt
gcggggcctgtgtggatggacgatgtggggtgtggaggaggagagcaggccctccgggac
tgtccccgaagcccctggggtcggagcaactgtgaccacagtgaggacgccggactggtc
tgcactggacctgccccccggctgcgcctggctgacggcccccatggctgtgctggccgc
ctggaggtctggcatggtgggcgatgggggtcggtgtgtgatgacgcctgggaccttcga
gatgctgccgtggcctgcagggagctgggctgtggtggggcgctggctgccccagggggt
gccttctttggagagggggctggccccatcatcttggatgatcttcgatgtcggggaaac
gagacggccttacgattctgcccagcgagaccctggggccagcatgactgtcaccatcgg
gaggatgctggggctgtgtgtgatggcatgccccttggcttcgtctcccccacggcccct
gctgtggacagcaacagctcagcacccagggaggcagcgaccagcccactttccaccata
atgggccagaccctagggacagcaggcggttcaccccctccagcctctcctactgctcct
tgggagcctgggccagaagctgggtcccctgggctgcgcctggtggctgggcccagcagg
tgctcaggccgactggaggtgtggcatgatgggcgctgggggacagtgtgtgatgacagc
tgggacacacgggactcagctgtggtctgccgagagctgggctgcggggggcctcggcag
ccagaccctgctgcgggacgctttggctggggcgcaggccccatctggctggacgacgtc
agctgtgtggggacagaggcttcactgtctgactgccctgctgctccctgggggaagcac
aactgcgctcacaatgaggatgtcggggtcacctgcacagggacccctggcctggacacc
atctcagaccctttcagttggagctggctccctgggatggggagagatcaggatgcctgg
ctcccaggagagctggttaccaaaccccctgtaagtttgacctccagtgtgctcgagaaa
accacgaaggcctcagggaaaatgcccaagagtactaagaagtgggtgaccaaaactaca
aagagaccaaccactcaacctcctgggatgtcaaccactaaaccctccaggggcctgagc
accccaaacctctcagaaccaacctccaagaccacaatcctgactactgaggcctcccca
aaaggaacctctgagccaaaaaggctgatctctgaggctccccacagactgacttcacac
accactactgagctgactcctcaggcaccctgggaatggacctcaaagactgtggcaatg
ctgtccacacaaagccccagagaaattacctctgaggccactgtcaagcaaagccctcag
gtctccctggagacatctgctgagatcccagaaggatctccagagccatccaaagactca
gtcccctcccccactgctagcagccttggggaatcaggcccctttcgggttcgtttggct
gatgggcccaacaggtgtgctggccggctagaagtatggcatgctggacgctgggggaca
gtctgtgatgacaactgggatctgagggatgccactgtggcctgctgggaactgggttgt
ggaaaggtccggccccgagtaggcaaaactcactatggccctgggacggggcccatctgg
ttggatgacatgggctgtaaagggacagagagttcactaagtgactgcccctcacggcca
tgggggaatcacaactgtgaccatgaagaagatgtggggcttacatgcactggctataca
gacgatgatgattatcctccctggacctgggaccccacttcaggagaggagctggccaaa
gggactactaccgcagcagggtctgaacacatgctttcctggggcaccaccaggcgccca
ggggtcccccttccagcaacacagcgacttccagacacaggtgaccaggatggtgacaag
ccttcccgtgcacaggatgtgtcttccagaaggggcccggtcaaggggacccccgcttca
gccacacctggacccactctaaccactggcaccaccaagagcccaggacagccctctcca
gctccagggtcctctggggacagaggtgccccgaggaagccgtggcccgagcgccgacct
tcgcgacccacggcagccaggacggcggcctccacctcctccgcctcgccctccctcgcg
ccagggtcatcgggcccgccgcccacccccgactcggcctcgacgagggaagcgaccacc
gaccccgcatacacttctccacccacccaggccgggcccgcctggaccgcgcccgacctc
gctctgtccactgccgactccagttcgggtccggctggggtcccggcgctctcctccact
cagtcgtccacctcacccagagagctgacctctgaccccactgcgccctcagagctgacc
ccagtgtctgacaccaccccagacctggagacagcttcttacccccaaacagccccagag
ccttctgggtccccagacccctccacaagcccttgccccactgcccccacacaccccatc
atgacccctggcgccaccgggacctctcaccccaacaggacccctcgcaccaccactgac
tccatcacctcccttcaccccaccacagtgcctcaccctactatgacccctgaactcacc
gtgacccctgaccctgccacagcccctcaccctgccacagctcagcctactgccaccatc
ctccccagtgggactccagaccccacctcaactccaggcatcactgccaagacccttgca
acctccctggggacggaacttccctctcccactctagcaccaaaggtcaaacccagcttg
cacccccagttgactgtagtagggaccccccaaacccccacattccaggtactgaaccta
gacccctccccagcctcagggtccagcccctcaaggacctctccagtgccaaacgtgggc
ccactgtccactgaggacttccagccacccacaggccagacccccagactaacgcctcca
cctgcccacaccccacactcagcctccgaccccactgtgactcctgacctccacctgcct
tcggtggctcaccccttggatcaacctccccctgaccacctccccccggggccagcccct
agccagatcccaggttccctcgaccagtgtgtatccccagtgcctcctgtaagggtcatg
gcttgtgagcctcctgccttggtggagctggtggatgctgtgagggatgtggctggccag
ctgcaacgactgacccaggtcctggaacaagaccgtcaggagcaccaagtcctggggctg
ggattagcccgactggtagaggctgctcagggactggggcagttgggtgaggctgtaaag
aatctggcagaggtggcccggccccccagcacgcctgtgcccaccacccccaccacccca
gaggaggaggagagacctctgaggggagatgtgtaa
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