Sciurus carolinensis (gray squirrel): 124967518
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Entry
124967518 CDS
T08117
Name
(RefSeq) small RNA 2'-O-methyltransferase-like
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124967518
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
124967518
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124967518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HENMT1_C
Methyltransf_23
Methyltransf_12
Methyltransf_25
Methyltransf_11
Spermine_synth
Methyltransf_31
MetW
Methyltransf_36
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
124967518
NCBI-ProteinID:
XP_047385902
LinkDB
All DBs
Position
1:112520025..112555796
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AA seq
393 aa
AA seq
DB search
MEEMNGQCNSVVDGNFEEVCPEKVIKFKPPLYKQRYQFVRDFVDQHKPKKVADLGCGDTE
LLRLLKIYPCIQRLVGVDIDKEKLQSNGHQLSPYLGEFVKPRDLDLTVILYHGSVVERDS
RLLGFDLITCIELIEHLDSDDLARFPEVVFGYLSPAMIVISTPNSEFNPLFPTVTLRDAD
HKFEWNRMEFQSWALQVANRYHYSVEFTGVGEPPAGAEHVGYCTQIGVFQKNSGKATELC
FSEQHDQHVYETVYKTSYPSLQQEKMLKFVLVGEVLILVERLRLRQQRVLREQKDSGTNP
GSTDSLGAPQIVLGAVFTEAEEARIENSPKPFCEGDKFFVPLQRLLAYPKVHRLRVDEER
MRSLIAGSVQLSIDGSAVVDDLYKSWDYRFEDY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatgaatggacagtgcaatagtgtggttgatggtaattttgaagaagtttgc
cctgagaaagtaattaagtttaaacctccattatacaaacaacgatatcagtttgttaga
gattttgtggatcaacataaacccaagaaggttgcagacctgggatgtggtgatacagag
ctcctaaggctgctaaaaatctacccatgtattcaacggcttgttggagtagatattgat
aaggaaaaattacagtcgaatggacatcagctgtctccctatttgggggagtttgtaaag
cctcgagatctggatttgaccgttatcttatatcatggctctgttgtggagagagattct
cgtttgcttggatttgacttgataacatgcattgaactaatagaacatttggattcagat
gatctggccagatttcccgaagtggtatttgggtacctatctccagccatgattgtcatc
agcacaccaaactctgaattcaaccccctgtttcccacagtgaccctaagagatgcagat
cataaatttgagtggaatagaatggagtttcagtcctgggctttacaagtggcaaatcgt
tatcattactctgtggagtttactggggtaggggaaccacctgctggagctgagcatgtt
ggatattgtacccagataggtgtcttccagaaaaatagtgggaaggcaacagaattgtgc
ttttcagagcagcatgatcaacacgtttatgaaactgtttataagacctcctacccaagt
ttgcaacaggagaagatgctcaaatttgtattggttggggaagtgttgatactagtggaa
cgactgagattgagacagcagcgagtgctgcgagaacagaaggactcaggcactaaccca
ggcagcactgactctttgggggcccctcagatagtgttgggagcagtcttcacagaggct
gaagaagccaggatagagaattctccaaaacccttctgtgaaggagataagttttttgta
cccctgcaaagactccttgcttatcccaaagtgcaccgcttacgtgtggacgaagagagg
atgagatcactcattgctggctcggtgcagctgagcatcgacggttctgcagtcgtggac
gacctgtataaatcttgggattatcggtttgaagattattga
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