Sciurus carolinensis (gray squirrel): 124967549
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Entry
124967549 CDS
T08117
Name
(RefSeq) growth/differentiation factor 6
KO
K20012
growth differentiation factor 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04350
TGF-beta signaling pathway
ncar04390
Hippo signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124967549
04390 Hippo signaling pathway
124967549
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124967549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ncar04052
]
124967549
Cytokines and neuropeptides [BR:
ncar04052
]
Cytokines
Transforming growth factors (RSTK binding)
124967549
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
124967549
NCBI-ProteinID:
XP_047385934
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Position
1:42039077..42055444
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AA seq
460 aa
AA seq
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MDTPRVLLSAVFLISFLWDLPGFQQASISSSSSAELDSTKGMRSRREGKMPRVQRESAAG
RTPQELQEPQPQPQDEPQRQSSHQTQAQEQPGRGPRVVPHEYMLSIYRTYSIAEKLGINA
SFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSTLSDKEELVGAELRLYRQAPAA
PWGPLAGPLHVQLFPCLSPLLLDSRTLDPQGAPPAGWEVFDVWQGLRHQPWKQLCLELRA
AWGEPDSWEVETRARGPQQPPPPDLRSLGFGRRVRSPQERALLVVFTRSQRKNLFAEMRE
QLGSAEAAGPGAGAEGSWPPPSGAPDAGPWLPSPGRRRRRTAFASRHGKRHGKKSRLRCS
KKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPGST
PPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatactcccagggtcctgctctcggcagttttcctcatcagtttcctgtgggatttg
cccggtttccaacaggcttccatctcctcctcgtcctccgctgagttggactccaccaag
ggcatgaggagccgcagggaagggaagatgccgcgggtgcagcgagagagtgccgcgggc
cggacaccccaggagctccaggagccccagccgcagccgcaggacgagccccagcggcaa
tcgtctcatcagacccaggcgcaggagcagcccggcagaggtccgcgcgtggtgccccac
gagtacatgctgtcaatctacaggacttattccattgcagagaagctgggcatcaatgcc
agctttttccagtcttccaagtcggctaatacgatcactagctttgtagacagaggacta
gacgatctctcgcacactcctctccggagacagaagtatttgtttgatgtgtccacgctc
tcagacaaagaagagctggtgggcgcagagctgcggctctatcgccaggcgcccgcagcg
ccctgggggcctctagcagggccgctccacgtgcagctcttcccttgcctgtcgcccctg
ctgttggactcgcggaccctagacccgcagggggcgcccccggccggctgggaggtcttc
gacgtgtggcagggcctacgccatcagccctggaagcagctgtgcttggagttgcgggcc
gcgtggggcgagccagactcctgggaggtggagacgcgcgcgcggggaccccagcagccg
ccgcccccggacttgcggagtctgggcttcggccggagggtgcggtccccacaggagcgc
gccctgctcgtggtgttcaccagatcccagcgcaagaacctgttcgctgagatgcgcgaa
cagctgggctccgctgaggctgcgggccccggcgcgggtgcggagggctcgtggccacca
ccgtcgggcgccccggacgccgggccttggctgccctcgcccggccggcggcggcggcgc
acggccttcgccagccgccacggcaagaggcatggcaagaagtcgaggctacgctgcagc
aagaagcccttgcacgtgaacttcaaggagctgggttgggacgactggattatcgcaccc
ttggagtacgaggcatatcattgcgagggcgtgtgcgacttcccgctgcgctcacacctg
gagccgaccaaccacgccatcatccagacgctgatgaactccatggatcccggttccacc
ccgcccagctgctgcgtgcccaccaaattgactcccatcagcattctgtacatcgacgcg
ggcaataatgtggtctacaagcagtatgaggacatggtagtggagtcctgcggctgcagg
tag
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