KEGG   Sciurus carolinensis (gray squirrel): 124967553
Entry
124967553         CDS       T08117                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124967553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124967553
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     124967553
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 124967553
NCBI-ProteinID: XP_047385936
LinkDB
Position
16:complement(52015692..52050872)
AA seq 632 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFIRLHSPPDKDEAEAPPQKVTVTKLGQFRVKEEDD
SASSLRPGALFFSRINKTSPATTSDPAGPSYAAATLQASSVTSSASPVSRTVSSTSKPQE
SSKGKRKLDMNLEEKKTPNKPSAQLSPPALKRPKLPAPARTPSTAPVPATAQGTMPGKPR
GDGTKTRGARSGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHL
ICAFANTPKYSQVLGLGGRIVCKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEEASHSGS
SGDEAPKLPRKHPQTKTKAPQGVVPSSPQRPSTPEETKTTLPGPQKDTDTEEDQSGQDNG
AEDSGDTEDELRRVAEQREQRPPPEQEENGEDPYAGSTDENTDNEEDPESPGLPIPELPD
FFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDN
PSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgccagagattcgcctccgccacgtcgtgtcctgcagcagccaggactcgacccactgt
gcagaaaaccttctcaaggcagacacttaccggaaatggagggcagccaaggctggcgaa
aagaccatctctgtggtgctgcagttggagaaggaggagcagatacacagcgtggacatt
gggaatgatggctctgccttcgtggaggtactggtgggcagctcagctggtggggccggc
gagcaagactatgaggtccttctggtcacctcatctttcatgtctccttctgagagccgt
agtggctcaaaccccaaccgtgttcgcatttttgggcctgacaagttggtccgggctgca
gcagagaagcgctgggaccgtgtcaagattgtgtgcagccagccctacagcaaggactcc
ccctatggcctgagttttatacggcttcatagtcccccagacaaagatgaggcagaggcc
ccaccccagaaggtgacagtgaccaagcttggccagttccgtgtaaaggaggaggatgac
agtgccagttccctgagaccaggggctctcttcttcagccggatcaacaagacatccccg
gccacaaccagtgacccagcagggcccagctatgcagcagccaccctccaggcctctagt
gtgacctcctcagcctctccagtttccaggactgtcagcagcacctccaagcctcaggag
tcttccaaagggaagaggaagttggatatgaatctagaagaaaagaagacccccaacaaa
ccgtcagcccagctctcaccacctgccctcaagaggcccaaattaccagctcctgcccgt
accccatccacagcccctgttcctgccacagcacaggggacaatgcccgggaagccccgg
ggagatggcaccaagaccaggggagcccgaagtggccctcaggagctggggaagatcctt
cagggtgtggtggtagttctgagtggcttccagaaccccttccgctcagagctccgggac
aaggctctggagctgggcgccaagtatcgtccagactggaccccggacagcactcacctc
atttgtgcctttgccaacacccccaagtacagccaggtcctgggcctcggaggtcgcatc
gtgtgtaaagaatgggtgctggattgtcaccgcatgcgtcggcgactgccctcccgaagg
tacctcatggcagggcctggctcaagcagcgaggatgaggaggcctctcacagtggcagc
agtggggatgaagcccccaagcttcctcgaaagcacccccaaaccaaaaccaaggccccc
cagggagtggtacccagttcaccccaaaggccctcaacccctgaagagaccaaaacaacc
ttgccaggaccccagaaagatactgacactgaggaggaccagtcaggacaagacaatgga
gcagaagattctggggacactgaggatgagctgaggagggtggctgagcagagggagcag
aggccacccccagagcaggaggagaacggcgaggacccttatgcaggctccacagacgag
aacactgacaatgaggaagacccagagtctcctggcctgccgatccctgagctcccagac
ttcttccagggcaaacacttcttcctgtatggggagttccctggagacgagcggcggaaa
ctcattcgatatgtcacagctttcaatggggagctcgaggactatatgagcgaccgggtt
cagtttgtgatcacagcacaggagtgggatcccagcttcgaggaggccttgatggacaac
ccctccctggcatttgttcgtcctcgatggatctacagttgcaacgagaagcagaagtta
cttcctcaccagctgtacggggtcgtgccccaggcctga

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