Sciurus carolinensis (gray squirrel): 124967567
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Entry
124967567 CDS
T08117
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124967567
04121 Ubiquitin system [BR:
ncar04121
]
124967567
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124967567
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Atypical E3
124967567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124967567
NCBI-ProteinID:
XP_047385964
LinkDB
All DBs
Position
16:complement(53572695..53576393)
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AA seq
584 aa
AA seq
DB search
MASVQASRRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHV
LPEGRSPGPPALKHPTTKDLAVAAAQGPQLPPPQAQPQPSGTGSGVSGPDRYDRATSSGR
LPLPSPALEYTLGSRLANGLGREEAVAEGARRALLGSMPSLMPPGLLAAAVSGLGGRGLT
LAPGLSPARPLFGSDFEKEKQQRNADCLAELNEAMRGRAEEWHGRPKAVREQLLALSACA
PFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYAGVLAVARQMFHDA
LREPGKALASSGFKYLEYERRHGSGEWRQLGELLTDGVRSFREPAPAEALPQQYPEPAPA
ALCGPPPRAPSRNLAPTPRRRKASPEPEGEAAGKMTTEEQQQRHWVAPGGPYSAETPGVP
SPIAALKNVAEALGHSPKDPGGGGGPVRAGGASPAASSTAQPPTQHRLVARNGEAEVSPT
AGAEAVSGGGSGTGATPGAPLCCTLCRERLEDTHFVQCPSVPGHKFCFPCSREFIKAQGP
AGEVYCPSGDKCPLVGSSVPWAFMQGEIATILAGDIKVKKERDP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtgcaggcgtcccgccgccagtggtgctacctgtgcgacctgcccaagatg
ccgtgggccatggtgtgggacttcagcgaggcggtgtgccgcggctgcgtgaatttcgag
ggcgcggaccgcatcgagctgctcatcgacgccgcccgccagctcaagcgcagccacgtg
ctcccggagggccgctcgcccgggcccccggcgctcaagcacccaaccaccaaggacctg
gctgtggccgccgcgcaggggccccaactaccgcccccgcaggcccagccccagccgtcg
gggaccggcagcggcgtctcaggcccggaccgctatgacagagccacatcgtcgggccgc
ctcccgctgccctcgccagccctggagtacaccctagggtcccgcctggccaatgggctg
ggccgagaggaggccgtggcggaaggggcgcgcagggccttgcttggctcaatgcccagc
ttgatgccccctgggctgctggcagctgcggtgtctggcctgggaggccgaggcctgacg
ctggcgcccggcttgagtcctgcccgtccacttttcggctccgatttcgagaaggagaag
cagcagaggaatgcagactgcctggcagaactgaacgaggctatgcggggccgggcagag
gagtggcatgggcgtcccaaagctgtgcgggaacagctactggcgctgtctgcctgtgcc
cccttcaatgtccgcttcaagaaagatcacgggctggtgggccgagtgttcgcctttgat
gctactgcccgcccaccaggatacgagttcgagctgaagcttttcaccgaatacccctgt
ggttctggcaatgtgtacgcgggggtcctggccgtggctcgccagatgttccacgatgct
ctgcgggagcctggcaaggccctggcctcctctggcttcaagtacctcgaatatgaacgc
cgtcatggctcaggcgaatggcgccagctaggcgagctgctcaccgatggtgtccgcagt
ttccgcgagcccgccccggcggaggccctgccccagcagtacccagagccggcccctgca
gctctgtgtggcccacctccgcgagccccatcccggaacctggcacccacgccgcgccgc
cgcaaggcctcccctgaacccgagggcgaggcggctgggaagatgaccacggaggagcag
cagcagcgacactgggtggcacctggcgggccatattctgctgagacccctggtgtgccc
tcacccattgccgccctgaagaatgtggcggaggccctgggccactcacccaaggaccct
ggtggaggcggaggccctgtgcgtgctgggggcgctagccctgcagcctcctccactgcc
cagccaccgacccagcatcgcctagtggcccgcaacggtgaggcagaagtcagtcccaca
gcgggagctgaagccgtcagcgggggtggtagtggcacaggggcgacccctggagctccc
ctttgctgtaccctgtgccgagagcgcctggaagacacccacttcgtccagtgcccctcg
gtgcccggacacaagttctgctttccctgctctcgggagttcatcaaggcgcagggcccg
gctggggaggtgtactgccccagtggagacaagtgcccgctggtgggttcctccgtcccc
tgggccttcatgcagggcgagatcgccaccattcttgctggagacatcaaggtcaagaaa
gaacgggacccctag
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