Sciurus carolinensis (gray squirrel): 124968330
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Entry
124968330 CDS
T08117
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar01524
Platinum drug resistance
ncar03430
Mismatch repair
ncar03460
Fanconi anemia pathway
ncar05200
Pathways in cancer
ncar05210
Colorectal cancer
ncar05213
Endometrial cancer
ncar05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124968330
03460 Fanconi anemia pathway
124968330
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124968330
09162 Cancer: specific types
05210 Colorectal cancer
124968330
05226 Gastric cancer
124968330
05213 Endometrial cancer
124968330
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
124968330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124968330
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124968330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Nrap
Motif
Other DBs
NCBI-GeneID:
124968330
NCBI-ProteinID:
XP_047386561
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Position
17:complement(32152489..32193787)
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AA seq
758 aa
AA seq
DB search
MSLVAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQ
IQDNGTGIRKEDLDIVCERFTTSKLQSFEDLARISTYGFRGEALASISHVAHVTITTKTA
DGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNITTRRKALKNPSEEYGKILEVV
GRYSIHNSGISFSVKKQGETVTDVRTLPNATIVDNIRSIFGNAVSRELIEVGCEDKTLAF
KMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIEMVYAAYLPKNTHPFLYLSLEISP
QNVDVNVHPTKHEVHFLHEESILERVQQHIEGKLLGSNSSRMYFTQTLLPGLAGSSGEVV
KSTTGVTSSSTSGSGDKVYAYQMVRTDSREQKLDAFLQPMSKALSSEPQATVPENRTDGS
SGEARPQDEEMLELPAPAEVPAKNQSLEEDAAKEASETAEKRAPSPSSGHPRKRHREDSD
VEMMESDSRKEMTAACTPRRRIINLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQW
ALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLKLSEPAPLFDLAMLALDSPESGWT
EEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDVDGNLIGLPLLIDNYVPPLEGLPIFIL
RLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSTSNPWKWTVEH
IVYKAFRSHLLPPKHFTEDGNVLQLANLPDLYKVFERC
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgtggcgggggttattcggcggctagacgagacagtggtgaatcgcatcgca
gcgggggaagttatccagcgtccggcaaatgcaatcaaagagatgattgaaaactgttta
gatgcaaaatccacaagtattcaagtggttgttaaagagggaggtctgaagttgattcag
atccaggacaatggcactggaatcaggaaggaagatctggatattgtgtgtgagaggttc
actacaagtaaactgcagtcctttgaagacttagcccgtatttctacctatggctttcgg
ggtgaggctttggccagcataagccatgtggctcatgttactattacaaccaaaacagct
gatggaaagtgtgcatacagagcaagttactcagatggaaagctgaaagctcctcctaaa
ccatgtgcagggaatcaagggacccagatcacggtggaggatcttttttacaacataacc
acaaggagaaaagctttaaaaaatccaagtgaagagtatggaaaaattttggaagttgtt
ggcagatattcaatacacaattcaggcattagcttctcagttaaaaaacaaggcgagaca
gtaactgatgtcagaacactacccaatgccacaattgtggacaatattcgctccatcttt
ggaaatgctgttagccgagaactgatagaagttgggtgtgaggataaaaccctagctttc
aaaatgaatggctacatatccaatgcaaactactcagtgaagaagtgcattttcttactc
ttcatcaaccatcgtctggtagaatcaacttccttgagaaaagccatagaaatggtgtat
gcagcatatttgcccaaaaacacacacccattcctatacctcagtttagaaatcagcccc
cagaacgtagatgtcaatgtgcaccctacaaagcacgaagtccacttcttgcatgaggag
agcatcctggagcgggtgcagcagcacattgagggcaagctcctgggctccaattcctcc
aggatgtactttacccagactttgctaccaggacttgcaggttcctctggggaggtggtt
aaatccacaacaggtgtgacctcctcatctacttctggaagtggtgacaaggtctatgct
taccaaatggtccgtacagattcccgggaacagaaacttgatgcctttctgcagcccatg
agcaaggccctgtccagtgagccccaggccactgtcccagagaataggacagatggttct
agtggtgaggccaggccgcaagatgaggagatgcttgaactcccagctcctgctgaggtg
cctgccaaaaatcagagcttggaggaagatgcagcaaaggaggcttcagaaacagcagag
aagagagcccccagtcccagctcaggccaccccagaaaaagacatcgggaagactctgat
gtggaaatgatggaaagtgattcccggaaggagatgactgcagcctgtaccccccggaga
aggatcattaacctcaccagtgttttgagtctgcaggaagaaattaatgagcggggacat
gagactctccgggagatgctgcataaccactcttttgtgggctgtgtaaatcctcagtgg
gccctggcacagcatcagactaagttatacctcctcaataccaccaaacttagtgaagaa
ctgttctaccagatactcatttatgattttgccaattttggtgttctgaagttatcggag
ccagcaccactgtttgaccttgccatgcttgccttagacagtcctgagagtggctggaca
gaggaagatggccccaaagaaggacttgctgaatacattgttgagttcctgaagaagaag
gctgagatgcttgcagactatttctctctggaaattgatgtggatgggaacctgattgga
ttaccccttctaattgacaattatgtgccccccttggagggactgcctatcttcatcctt
cgactagccacagaggtgaattgggatgaagaaaaggaatgttttgaaagcctcagtaaa
gaatgtgctatgttttattctatccggaagcagtacatatcagaggagtcgaccctttca
ggccaacagagtgaggtgccaggctccacatcaaatccctggaagtggactgtggaacac
attgtctataaagcatttcgctcacaccttctgcctcctaaacatttcacagaagatgga
aatgtcctgcagcttgctaatctgcctgatctgtacaaagtctttgagaggtgttaa
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