KEGG   Sciurus carolinensis (gray squirrel): 124968359
Entry
124968359         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04010  MAPK signaling pathway
ncar04020  Calcium signaling pathway
ncar04022  cGMP-PKG signaling pathway
ncar04024  cAMP signaling pathway
ncar04218  Cellular senescence
ncar04260  Cardiac muscle contraction
ncar04261  Adrenergic signaling in cardiomyocytes
ncar04270  Vascular smooth muscle contraction
ncar04530  Tight junction
ncar04713  Circadian entrainment
ncar04723  Retrograde endocannabinoid signaling
ncar04724  Glutamatergic synapse
ncar04725  Cholinergic synapse
ncar04726  Serotonergic synapse
ncar04727  GABAergic synapse
ncar04728  Dopaminergic synapse
ncar04911  Insulin secretion
ncar04912  GnRH signaling pathway
ncar04921  Oxytocin signaling pathway
ncar04924  Renin secretion
ncar04925  Aldosterone synthesis and secretion
ncar04927  Cortisol synthesis and secretion
ncar04929  GnRH secretion
ncar04930  Type II diabetes mellitus
ncar04934  Cushing syndrome
ncar04935  Growth hormone synthesis, secretion and action
ncar04973  Carbohydrate digestion and absorption
ncar05010  Alzheimer disease
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05031  Amphetamine addiction
ncar05207  Chemical carcinogenesis - receptor activation
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124968359
   04020 Calcium signaling pathway
    124968359
   04024 cAMP signaling pathway
    124968359
   04022 cGMP-PKG signaling pathway
    124968359
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    124968359
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124968359
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    124968359
   04929 GnRH secretion
    124968359
   04912 GnRH signaling pathway
    124968359
   04921 Oxytocin signaling pathway
    124968359
   04935 Growth hormone synthesis, secretion and action
    124968359
   04924 Renin secretion
    124968359
   04925 Aldosterone synthesis and secretion
    124968359
   04927 Cortisol synthesis and secretion
    124968359
  09153 Circulatory system
   04260 Cardiac muscle contraction
    124968359
   04261 Adrenergic signaling in cardiomyocytes
    124968359
   04270 Vascular smooth muscle contraction
    124968359
  09154 Digestive system
   04973 Carbohydrate digestion and absorption
    124968359
  09156 Nervous system
   04724 Glutamatergic synapse
    124968359
   04727 GABAergic synapse
    124968359
   04725 Cholinergic synapse
    124968359
   04728 Dopaminergic synapse
    124968359
   04726 Serotonergic synapse
    124968359
   04723 Retrograde endocannabinoid signaling
    124968359
  09159 Environmental adaptation
   04713 Circadian entrainment
    124968359
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    124968359
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124968359
   05020 Prion disease
    124968359
   05022 Pathways of neurodegeneration - multiple diseases
    124968359
  09165 Substance dependence
   05031 Amphetamine addiction
    124968359
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124968359
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124968359
   05414 Dilated cardiomyopathy
    124968359
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    124968359
   04934 Cushing syndrome
    124968359
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ncar04040]
    124968359
Ion channels [BR:ncar04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   124968359
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 124968359
NCBI-ProteinID: XP_047386617
LinkDB
Position
17:complement(55280495..55587019)
AA seq 2179 aa
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAA
RQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACI
SIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKI
IAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKT
CFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS
GEGETQGCCGSLWCWWKRRGTAKTGPSGCRRWGQAISKSKLSRRWRRWNRFNRRRCRAAV
KSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQ
AYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLV
ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQ
ILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAES
LNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPP
CDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCH
KLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTT
FGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFI
LYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENIGP
VYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPXNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDIL
NMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESENVPVP
TATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAML
FFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKL
CDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPH
HLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNS
DGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDE
VTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISC
DLQDDEPEETKREDEDVFKRNGALLGNHVNHVNSDRRDSLQQTNTTHRPLHVQRPSIPPA
SDTEKPLFPPAGNSVCHNHHNHNSIGKQVPTSTNANLNNANMSKAAHGKRPSLGNLEHVS
ENGHHSSHKHDREPQRRSSIKRTRYYETYIRSDSGDEQLPTICREEPDIHGYFRDPRLGE
PEYFSSEECYEDDSSPTWSRRNYSYYNRCPGSSMDFERPRGYHPPLGFWEDDDSPISYDS
RRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPALPHRAALPLHLMQQQIMAVA
GLDSSKAQKYSPSHSTRSWATPPATPPYRDWTPCYTPLIQVERSESLDQVNGSLPSLHRS
SWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVS
ATKHEIADACDLTIDEMESAASTLLNGSVCPRANGDLGPASHRQDYELQDFGPGYSDEEP
DPGRDEEDLADEMICITTL
NT seq 6540 nt   +upstreamnt  +downstreamnt
atgatgatgatgatgatgatgaaaaaaatgcagcatcaacggcagcagcaagcggaccac
gcgaacgaggcaaactatgcaagaggcaccagactccctctttctggtgaaggaccaact
tctcagccgaatagctccaagcaaactgtcctgtcttggcaagctgcaatcgatgctgcc
agacaggccaaggctgcccaaactatgagcacctctgcacccccacctgtaggatctctc
tcccaaagaaaacgtcagcaatacgccaagagcaaaaaacagggtaactcgtccaatagc
agaccagcccgcgcccttttctgtttatcactcaataaccccatccgaagagcctgcatt
agtatagtggaatggaaaccatttgacatatttatattattggctatttttgccaattgt
gtggccttagctatttacatcccattccctgaagatgattctaattcaacaaatcataac
ttggaaaaagtagaatatgccttcctgattatttttacagttgagacatttttgaagatt
atagcatatggattattgctacatcctaatgcttatgttaggaatggatggaatttactg
gattttgttatagtaatagtaggattgtttagtgtaattttggaacaattaaccaaagaa
acagaaggcgggaaccactctagcggcaaatcaggaggctttgatgtcaaagccctccgt
gccttccgagtgttacgaccacttcgactagtatcaggagtgcccagtttacaagttgtc
ctgaactccattataaaagccatggttcccctccttcacatagcccttttggtattattt
gtaatcataatctatgctattataggattggaactttttattggaaaaatgcacaaaaca
tgtttttttgctgactcagatatcgtagctgaagaggacccagctccatgtgcgttctca
gggaatggacgccagtgtaccgccaatggcacggaatgtaggagtggctgggttggccca
aatggaggcatcaccaactttgataactttgcctttgccatgctcaccgtgtttcagtgt
atcaccatggagggctggacagatgtgctgtactgggtaaatgatgcgataggatgggaa
tggccatgggtgtattttgttagtctgatcatccttggctcatttttcgtccttaacctg
gttcttggtgtccttagtggagaattctcaaaggaaagagagaaggctaaagcacgggga
gatttccagaaactccgggagaaacagcaactggaggaggatctcaagggctacttggat
tggatcacccaggcagaagatattgatcctgagaatgaagaggagggcggagaggaaggc
aaacgaaataccagcatgcccaccagtgagactgaatctgtgaatacagagaacgtaagt
ggtgaaggcgagacccagggctgctgtggaagtctctggtgctggtggaaaagaagaggc
acggccaagacggggccctcggggtgccggcggtggggccaagccatctcaaaatccaaa
ctcagccgacgctggcgtcgctggaaccgattcaatcgcagaagatgtagggctgccgtg
aagtctgtcacgttctattggttggttattgtcctggtgtttctcaacactttaaccatt
tcctctgagcactacaatcagccggactggttgacgcagattcaagatattgctaacaaa
gtcctcttggctctcttcacctgtgagatgctggtaaaaatgtacagcttgggtctccag
gcatatttcgtctctctcttcaaccggtttgattgctttgtggtatgtggcggaattact
gagaccatcttggtggaattagaaatcatgtcccctttggggatctctgtgttccggtgt
gtgcgcctcttgagaatcttcaaagtgaccaggcattggacctctctgagcaacttggtg
gcatccttattaaactccatgaagtctattgcttcattgttgcttctgctttttctcttc
attatcatcttttccttgcttgggatgcagctgtttggcggcaagtttaattttgatgaa
actcaaaccaagcgaagcacctttgacaacttcccccaagcacttctgacagtatttcag
attctgacaggcgaggactggaatgctgtgatgtatgacggcatcatggcttatggaggc
ccatcctcctcaggaatgatcgtctgcatctacttcatcatcctcttcatctgcggtaac
tatattctactgaatgtcttcttggccatcgctgtcgacaatttggctgatgctgaaagt
ttgaatactgctcagaaagaggaggctgaagaaaaggaaaggaaaaagattgccagaaaa
gagagcctagaaaataaaaagaacaacaaaccggaagtcaaccagatagccaacagtgac
aacaaggttacaattgatgactatcgagaggaggatgaagacaaggacccttacccacct
tgtgatgtgccagtaggtgaagaggaagaggaggaggaggaagatgaacctgaggttcct
gctggtccccgtcctcgaagaatctcggagttgaacatgaaggagaaaattgcccccatc
cctgaagggagcgctttcttcattcttagcaagaccaacccgatccgagtgggctgccac
aagctcatcaaccaccacatcttcaccaacctcatcctcgtcttcatcatgctgagcagc
gctgctcttgcggcagaggaccccatccgcagccattcctttcggaacactatactgggt
tactttgactatgctttcacagccatctttactgttgaaatcctgttaaagatgacgact
tttggagctttcctacacaaaggggctttctgcaggaactacttcaatttgctggatatg
ctggttgttggggtatctctggtgtcatttgggattcaatcgagtgccatttctgtcgtg
aagattctgagggtcttaagggtcctgaggcccctgagagcgatcaacagagcaaaagga
cttaagcatgttgtccagtgcgtcttcgtggcaattcggacaattggcaacatcatgatc
gttaccaccctcctccagttcatgtttgcctgcatcggggtgcagttgttcaagggaaag
ttctatcgctgcacagatgaagccaaaagtaaccccgaagaatgcaggggactttttatc
ctctacaaagatggggatgttgatagtcccgtggtccgtgagagaatctggcaaaatagc
gatttcaactttgacaacgtcctttctgctatgatggcgctcttcactgtctccactttt
gagggttggcctgcgttgctgtataaagccattgactcaaatggagagaacattggtcca
gtctacaactaccgtgtggagatctccatcttcttcatcatctacatcatcattgtcgcc
ttcttcatgatgaacatctttgtgggctttgtcatcgttacatttcaggagcagggagaa
aaagagtataagaactgtgagctggacaaaaatcagcgccagtgtgttgaatacgccttg
aaagcacgtcccttgcggagatacatccccnaaaacccctaccagtacaagttctggtac
gtggtgaactcttcgcctttcgaatacatgatgtttgtcctcatcatgctcaacacactc
tgcttggccatgcagcactatgagcagtccaagatgttcaatgatgccatggacattctg
aacatggtcttcactggggtgttcaccgtggagatggttttgaaagtcatcgcattcaag
cctaaggggtattttagtgacgcctggaacacgtttgactccctcatcgtaatcggcagc
attatagacgtggctctcagcgaagcagatccaactgaaagtgaaaatgtccctgtccca
actgctacacctgggaactctgaagagagcaatagaatctccatcacctttttccgtctt
ttccgagtgatgcgattggtgaagctcctcagcaggggagaaggcatccggacattgctg
tggacttttattaagtcctttcaggcgctcccatatgtcgccctccttattgccatgctg
ttcttcatctacgcagtcattggcatgcagatgtttgggaaagttgccatgagagataac
aaccagatcaataggaacaacaacttccagacgtttccccaggcggtgctgctgctcttc
aggtgtgcaaccggggaggcctggcaggagatcatgctggcctgcctcccggggaagctc
tgtgaccctgagtctgattacaaccctggcgaggaatacacgtgtgggagcaactttgcc
attgtctatttcatcagcttttacatgctctgtgcgtttctgattatcaatctgtttgtg
gctgtcatcatggataattttgattatctgacacgggactggtctattctggggcctcac
catttagatgaatttaaacgaatatggtcagaatatgaccctgaggcaaagggaaggata
aaacaccttgatgtggtcactctgctccgacgtatccagcctcctctggggtttgggaaa
ttatgtccacacagagtagcgtgcaagagattagtggccatgaacatgcctctcaacagt
gacgggacagtcatgtttaacgcaaccctgtttgctttggtccgaacagctctcaagatc
aagactgaagggaacctggaacaagctaatgaagaacttagagctgtgataaagaaaata
tggaagaaaaccagcatgaagctgcttgaccaagtggtccctccagctggtgatgatgag
gtaaccgtggggaagttctatgccactttcctgatacaggactactttaggaaattcaag
aaacggaaagaacaaggattggtgggaaagtaccctgcgaagaacaccacaatagcccta
caggcgggattaaggacactgcatgacattgggccagaaatccggcgtgctatatcctgt
gatttacaagatgacgagccggaggaaacaaaacgagaagatgaagatgtattcaaaaga
aatggtgccctgcttggaaaccatgtcaatcatgttaatagtgataggagagattccctt
cagcagaccaataccacccaccgtcccctgcatgtccaaaggccttcaattccacctgca
agtgacactgagaaaccgctgtttcctccagcaggaaattcggtgtgtcataaccatcat
aaccataattccataggaaagcaagttcccacctcaacaaatgccaatctcaataatgcc
aatatgtccaaagctgcccatggaaagcggcccagccttgggaaccttgagcatgtatct
gaaaatgggcatcattcctcccacaagcatgaccgggagcctcaaagaaggtccagtatt
aaaagaactcgctattatgaaacttacattaggtctgactcaggagatgagcagctccca
actatttgccgggaagagccagacattcatggctacttcagggacccccgcttgggggag
ccggagtatttcagcagtgaggagtgctatgaggacgacagctctcccacctggagcagg
cgaaactacagctactacaacaggtgcccaggcagcagcatggactttgagcggccccga
ggctaccaccctcccctgggcttctgggaggacgatgactcccccatcagctacgactct
cggagatctccccggagacgcctgctacctcccaccccaacatcccaccggagatcctcc
ttcaacttcgagtgcctgcgcaggcagagcagccaggaggaggtcccgccgtcacctgcc
ctgccacaccgagcggccctgcctctgcacctgatgcagcagcagatcatggcagttgca
ggcctggattcgagtaaggcccagaagtactcaccaagccactcgacccggtcgtgggcc
acccctccagcgacccctccgtaccgggactggacgccgtgctacacccccctgatccag
gtggagcggtcagagtccctggaccaggtcaacggcagcctgccatccctgcaccgcagc
tcctggtacacagatgagcctgacatctcctataggacattcacaccagccagcctgact
gtccccagcagctttcggaacaaaaacagcgacaagcagaggagcgcagacagcttggtg
gaggcagtcctgatatctgaaggcttgggacgctacgcaagggacccaaaatttgtgtca
gctacaaaacatgagatcgcggatgcttgtgacctaaccatcgatgagatggaaagtgcg
gccagtaccctgctcaatgggagcgtgtgtcctcgggccaacggggatctgggccctgcc
tcacaccggcaggactatgagctccaggacttcggtccaggctacagtgacgaagagcca
gaccctggacgagacgaggaggacctggcggatgaaatgatctgcatcaccaccttgtag

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