KEGG   Sciurus carolinensis (gray squirrel): 124968378
Entry
124968378         CDS       T08117                                 
Name
(RefSeq) C-C chemokine receptor type 5 isoform X1
  KO
K04180  C-C chemokine receptor type 5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03250  Viral life cycle - HIV-1
ncar03260  Virion - Human immunodeficiency virus
ncar04060  Cytokine-cytokine receptor interaction
ncar04061  Viral protein interaction with cytokine and cytokine receptor
ncar04062  Chemokine signaling pathway
ncar04144  Endocytosis
ncar05145  Toxoplasmosis
ncar05163  Human cytomegalovirus infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124968378
   03260 Virion - Human immunodeficiency virus
    124968378
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124968378
   04061 Viral protein interaction with cytokine and cytokine receptor
    124968378
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124968378
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    124968378
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    124968378
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124968378
   05163 Human cytomegalovirus infection
    124968378
   05167 Kaposi sarcoma-associated herpesvirus infection
    124968378
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    124968378
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ncar04030]
    124968378
   04050 Cytokine receptors [BR:ncar04050]
    124968378
   04090 CD molecules [BR:ncar04090]
    124968378
G protein-coupled receptors [BR:ncar04030]
 Rhodopsin family
  Chemokine
   CC Chemokine
    124968378
Cytokine receptors [BR:ncar04050]
 Chemokine receptors
  CC Chemokine
   124968378
CD molecules [BR:ncar04090]
 Proteins
  124968378
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx
Other DBs
NCBI-GeneID: 124968378
NCBI-ProteinID: XP_047386658
LinkDB
Position
17:complement(24629738..24646565)
AA seq 375 aa
MCTAQLARGAETSVPPTRNSGSMNMDYQVSSPSYDIDYGMSDPCQKIDVRQVAARLLPPL
YSLVFIFGVVGNLLVVLTLINCKRLKSMTDIYLLNLAISDLLFLLTLPFWAHYAAAQWDF
GNTMCQLLTGVYFIGFFSGIFFIILLTIDRYLAIVHAVFALKARTVTFGMVTSGVTWVVA
VLASLPGMIFSRSQKEGSRHTCSPHFPTSQYHFWKTFLTLKMITLGLVLPLLVMVICYSG
ILRTLLRCRSEKRHKAVRLIFVIMIVYFLFWAPYNIVLLLTTFQEFFGLNNCNSSNRLDR
AMQVTETLGMTHCCINPVIYAFVGEKFRRYLLVFFQKHMAKRFCQFCPIFQREGPERTSS
VYTRSTGEQEISVGL
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgtgcacagctcagttggccagaggagctgagacatccgttccccctacaagaaactct
gggtcaatgaacatggattatcaagtgtcaagtcccagctatgacatcgattatgggatg
tcagacccctgccaaaaaattgacgtgaggcaagttgcggcccggctcctgcccccgctc
tactcgctggtgttcatctttggtgtcgtgggcaacctgctggtcgtcctcaccctgatc
aactgcaaaaggttgaagagcatgactgacatctacctgctcaatctggccatctctgac
ctgcttttcctgctcaccctcccattctgggctcactatgccgcagcccaatgggacttt
ggaaatacaatgtgtcagcttttgacaggggtctattttataggcttcttctctggaatc
ttcttcatcatcctcttgacaattgacaggtacctggctatcgtccacgccgtatttgct
ctcaaggccaggacggtcacctttgggatggtgacaagtggggtcacctgggtagtggca
gtgcttgcctctctcccaggaatgatctttagcagatctcaaaaagaaggttctcgtcat
acctgtagtcctcattttccaaccagtcaatatcatttctggaagaccttcctgacgtta
aagatgatcaccttaggcctggtgctgccgctgctcgtcatggtcatctgctactcggga
atcctgagaaccctgcttcggtgtcggagtgagaaaaggcacaaggctgtgaggctcatc
tttgtgatcatgattgtctattttcttttctgggctccctacaacatcgtcctcctcctg
accaccttccaggaattctttggcctgaataattgcaacagttcaaacagactggaccga
gccatgcaggtgacggagactctcgggatgacacactgctgcatcaaccccgtgatctat
gccttcgtcggggagaagttcagaaggtatctcttggtgttcttccaaaagcacatggcc
aagcgcttttgccagttctgtcccatcttccagagagagggtcctgagcgcacaagctca
gtgtatacccgatctactggggagcaggaaatctctgttggtttgtga

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