KEGG   Sciurus carolinensis (gray squirrel): 124968383
Entry
124968383         CDS       T08117                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124968383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncar03009]
    124968383
Ribosome biogenesis [BR:ncar03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    124968383
SSDB
Motif
Pfam: EloA-BP1
Other DBs
NCBI-GeneID: 124968383
NCBI-ProteinID: XP_047386667
LinkDB
Position
17:complement(809446..833768)
AA seq 1230 aa
MLRSTGFFRAIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGGGGAASPAAGLGYDPYN
PELPQPPAQRENGSPGQGLEPRPDILELELVNQAIEAVRSEVELEQRRYQELLETARECG
SAEYGSGGASALAPCGPAASSTAALDKDAFPLTFSYASSSHGLLTPDASYQPTPLATPAE
LCSKYSLASLERGQGKVGGGSSTLEYVPKAVSQSRRYGRPVPSGKYVVDNSKPSTDLEYD
PLSNYSARHLSRASSRDERATKRPRGCRGSEPYTPALKKPCDPFGGCDARFSDSEDDTSP
AAADGPATASSPPAEASPSTAGTSPKSKVPGKPSLKEGLEPEEGSQRETKEMAVQYDVGD
LGQPPKGPGGASPARASQGQGGPKEGKPKKKKSGSSLALGHKDSARKKDKTKDRDPGRPE
KVSSEKMGLQTGSPRHKTERPEGTKKKPSSATPVASSGKGRPDRPGRQPSPTSGGPRPQD
SRPSPHQPPDRKGSRKTPSGKLVERKARSLDEGASQEAPKLKKRALSHAELFGDESEDEG
PGPGALQVLPPALPSLSSDSESDSDSSLGFPAPQLPKRLKASPPPSPVPSSSSSSSGAGE
GTEEDVDYSALEKEVDFDSDPMEECLRIFNESTNVKTEDKGRLARQPPEDGRSEEKGRAG
LTTLFPGQKRRISHLSKQGKEAEPPRRGPAVLPARPPTAQEVCYRRAQQMQRESASWLQA
APRPAEKPSSVHIAAPGEKRRIAHIPNPLLAAAPTGAKRTLSASSSQASHGPEPGSQPLK
TRTLSGMASKTTTTITPKRVAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLK
FCSSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLVPSTVPGLSKASGRRVV
SHEVVLGGKLAAKTSFSLSRPSSPRVEDLKGAALYSRLRDYLLTPEQLQENGYPFPHPER
PGGAVILTAEEKKPKDPSCRICCRCGAEYLVSSSGRCVREEECHYHWGRLRRSRVAGGWE
TQYMCCSAAVGSVGCQVAKQHVQDGRKENLEGFVRTFEKELSEDTHAGIYALDCEMSYTT
YGLELTRVTVVDTELRVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSITLRDVQAVLLS
MFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQD
NVDGHSSSEDASACMHLVIWKIREDAKTKR
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgctacgctccactggcttcttccgggctatcgactgcccctactgggcgggggcgccc
ggggggccctgccggcggccctactgccacttccggcaccgcggggcccgggggcccggc
gcgccgggcggtggcggagcggcgtcccccgcagcagggcttggctatgacccgtacaac
cccgagctgccccagcccccagcacagagggagaatggctccccgggccagggactggag
ccccgcccagacatcctggagctggagctcgtcaaccaggccatcgaggccgtgcgcagt
gaggtggagctggagcagcggcgctaccaggagctgctggagacggcccgcgagtgcggc
tcggctgagtatggctctggtggggcgtctgccctggccccctgtggccctgctgccagt
tccaccgcggccctggacaaggacgccttcccgctgacctttagctatgcctccagcagc
catggcctgctgacccctgatgccagctaccaacccaccccactggccacccctgctgag
ctgtgcagcaagtattcactggcatctctggagaggggtcagggcaaggttggtgggggc
agcagcaccctggagtatgttcccaaggctgtgagccagtcccggaggtatggccgccct
gtgcccagcggcaagtatgtagtggacaactcgaagccgtccaccgacctggagtatgac
ccactctccaattactcagcccggcacctcagcagggccagctccagggatgagagggcc
accaagcggccccggggctgccgtggcagcgaaccctatacgcctgctctcaagaagccc
tgtgacccctttggtggctgtgatgccaggttctcagattctgaggatgacaccagtcca
gctgcagcagatgggccggccacagctagctcccccccggctgaggccagtccctccacg
gctgggacaagccccaagagcaaggtccctgggaagccatccctgaaggagggcttggag
ccggaggagggcagtcagcgggagaccaaggagatggctgttcagtatgatgtgggggac
ctagggcagcctccaaagggcccaggaggggcatccccggccagggcctcacagggtcag
ggtggccccaaggagggcaaacccaagaaaaagaaaagtgggagctcactagcccttggc
cacaaggacagtgcccggaagaaggacaagaccaaggacagagacccagggcggcctgag
aaggtcagctcagaaaagatgggcctgcagactggcagcccccggcacaagacggagcgg
ccagaagggaccaagaaaaagccatcttcagccacgccagtggccagctcagggaaaggg
aggcctgaccgcccagggcggcagccgagccccactagtgggggcccccggccccaggac
tctcgtcccagtccccaccagccgcccgacaggaagggcagcaggaagacgccatcgggg
aagctggtggagcgcaaggcccgctcactggacgagggtgcctctcaggaggcccccaag
ctgaagaagcgggccttaagccacgcggagctcttcggggatgagagcgaggatgagggc
ccagggcctggggccctgcaggtcttgccccctgccctccccagcctcagctctgactca
gaatctgactcggactccagcctgggcttccctgccccgcagctgcccaagcgtctcaag
gcctccccgcccccatcccctgtgccctcctcctcctcctcctcctcaggggctggggag
ggtacagaggaggacgtggactactcggccctggagaaggaggtcgactttgactccgac
cccatggaggagtgcctgcggattttcaacgagtccaccaacgtgaagacggaggacaag
ggccggctggcccggcagccccctgaggacgggaggagtgaggagaaggggcgtgcaggc
ctgaccaccttgttcccagggcagaagaggagaatctcgcatctttctaagcagggcaag
gaggcggagcccccgaggaggggcccagcggtgctcccagcccggcccccaactgcccag
gaggtgtgctacaggcgggcccagcagatgcagagggagtcggccagctggctgcaggct
gccccacggccagccgaaaagccctcctccgtccacattgctgcacctggcgagaaaagg
aggatcgcccacatccccaaccccctcttagccgcggcccccacaggtgccaagaggacc
ctctcggccagcagcagccaggcctcccatggccctgagcctggcagccagccgctgaag
actcgcacgctgtcagggatggcgtccaagaccaccaccaccatcacccccaagcgcgtc
gctcacagtccatctctacagagtctaaagaaacccattatcccaaaagagtttgggggc
aaggtccccaccgtcatccgccaacgctatctcaacctgtttatcgaggagtgtctcaaa
ttctgctcatccaaccaggaggccatagagaaggcgctgaatgaggagaaggtggcctat
gaccgcagccccagcaagaatatctacctgaatgtcgccgtgaacacactcaagaagctc
aggggcctggtccccagcactgtgcccggtctcagtaaagccagtggccggagggttgtg
tcccacgaagtggtcctaggggggaagttggctgccaagaccagcttctcactcagccgc
cccagcagtccccgggtggaggacctaaaaggggccgccctctacagccgcctcagggac
tacctgctcaccccggagcagctgcaggagaatggctaccctttcccccaccctgagcgg
cccgggggcgccgtcatcctcacggccgaggagaagaagcccaaggacccctcctgcaga
atctgctgccgctgtggcgccgagtacctggtgtcctcctctggccgctgcgtccgtgag
gaggagtgccactaccactgggggcggctgcggcggagccgagtggccgggggctgggag
acgcagtacatgtgctgctcggccgccgtcggctccgttggctgtcaggtcgcaaagcaa
cacgtgcaggacggccggaaggaaaacctggaaggcttcgtgaggaccttcgagaaggag
ctttcggaagacacccacgcggggatctacgccctggactgcgagatgtcctacaccacg
tatggcctggagctgacgcgcgtcacggtggtggacacggagctgcgtgtggtgtacgac
accttcgtcaagcccgacaacgagatcgtggactacaacaccaggttttcaggggtgaca
gaggctgacctcgcggacacgagcatcacgctgcgggatgtccaggctgtcctgttgagc
atgttcagcgccgacaccatcctcattggacacagcctggagagtgacctgctagccttg
aaggtcatccacagcaccgtggtggacacatctgtgctgttccctcaccgcctgggcctc
ccctacaagcgctccctgcggaacctcatggccgactacctcagacagatcatccaggac
aacgtggacgggcacagctccagcgaggacgccagcgcctgcatgcacctagtgatctgg
aagatccgagaagacgccaagaccaagcgatga

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