Sciurus carolinensis (gray squirrel): 124968383
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Entry
124968383 CDS
T08117
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124968383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124968383
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
RNases
124968383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
124968383
NCBI-ProteinID:
XP_047386667
LinkDB
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Position
17:complement(809446..833768)
Genome browser
AA seq
1230 aa
AA seq
DB search
MLRSTGFFRAIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGGGGAASPAAGLGYDPYN
PELPQPPAQRENGSPGQGLEPRPDILELELVNQAIEAVRSEVELEQRRYQELLETARECG
SAEYGSGGASALAPCGPAASSTAALDKDAFPLTFSYASSSHGLLTPDASYQPTPLATPAE
LCSKYSLASLERGQGKVGGGSSTLEYVPKAVSQSRRYGRPVPSGKYVVDNSKPSTDLEYD
PLSNYSARHLSRASSRDERATKRPRGCRGSEPYTPALKKPCDPFGGCDARFSDSEDDTSP
AAADGPATASSPPAEASPSTAGTSPKSKVPGKPSLKEGLEPEEGSQRETKEMAVQYDVGD
LGQPPKGPGGASPARASQGQGGPKEGKPKKKKSGSSLALGHKDSARKKDKTKDRDPGRPE
KVSSEKMGLQTGSPRHKTERPEGTKKKPSSATPVASSGKGRPDRPGRQPSPTSGGPRPQD
SRPSPHQPPDRKGSRKTPSGKLVERKARSLDEGASQEAPKLKKRALSHAELFGDESEDEG
PGPGALQVLPPALPSLSSDSESDSDSSLGFPAPQLPKRLKASPPPSPVPSSSSSSSGAGE
GTEEDVDYSALEKEVDFDSDPMEECLRIFNESTNVKTEDKGRLARQPPEDGRSEEKGRAG
LTTLFPGQKRRISHLSKQGKEAEPPRRGPAVLPARPPTAQEVCYRRAQQMQRESASWLQA
APRPAEKPSSVHIAAPGEKRRIAHIPNPLLAAAPTGAKRTLSASSSQASHGPEPGSQPLK
TRTLSGMASKTTTTITPKRVAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLK
FCSSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLVPSTVPGLSKASGRRVV
SHEVVLGGKLAAKTSFSLSRPSSPRVEDLKGAALYSRLRDYLLTPEQLQENGYPFPHPER
PGGAVILTAEEKKPKDPSCRICCRCGAEYLVSSSGRCVREEECHYHWGRLRRSRVAGGWE
TQYMCCSAAVGSVGCQVAKQHVQDGRKENLEGFVRTFEKELSEDTHAGIYALDCEMSYTT
YGLELTRVTVVDTELRVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSITLRDVQAVLLS
MFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQD
NVDGHSSSEDASACMHLVIWKIREDAKTKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctacgctccactggcttcttccgggctatcgactgcccctactgggcgggggcgccc
ggggggccctgccggcggccctactgccacttccggcaccgcggggcccgggggcccggc
gcgccgggcggtggcggagcggcgtcccccgcagcagggcttggctatgacccgtacaac
cccgagctgccccagcccccagcacagagggagaatggctccccgggccagggactggag
ccccgcccagacatcctggagctggagctcgtcaaccaggccatcgaggccgtgcgcagt
gaggtggagctggagcagcggcgctaccaggagctgctggagacggcccgcgagtgcggc
tcggctgagtatggctctggtggggcgtctgccctggccccctgtggccctgctgccagt
tccaccgcggccctggacaaggacgccttcccgctgacctttagctatgcctccagcagc
catggcctgctgacccctgatgccagctaccaacccaccccactggccacccctgctgag
ctgtgcagcaagtattcactggcatctctggagaggggtcagggcaaggttggtgggggc
agcagcaccctggagtatgttcccaaggctgtgagccagtcccggaggtatggccgccct
gtgcccagcggcaagtatgtagtggacaactcgaagccgtccaccgacctggagtatgac
ccactctccaattactcagcccggcacctcagcagggccagctccagggatgagagggcc
accaagcggccccggggctgccgtggcagcgaaccctatacgcctgctctcaagaagccc
tgtgacccctttggtggctgtgatgccaggttctcagattctgaggatgacaccagtcca
gctgcagcagatgggccggccacagctagctcccccccggctgaggccagtccctccacg
gctgggacaagccccaagagcaaggtccctgggaagccatccctgaaggagggcttggag
ccggaggagggcagtcagcgggagaccaaggagatggctgttcagtatgatgtgggggac
ctagggcagcctccaaagggcccaggaggggcatccccggccagggcctcacagggtcag
ggtggccccaaggagggcaaacccaagaaaaagaaaagtgggagctcactagcccttggc
cacaaggacagtgcccggaagaaggacaagaccaaggacagagacccagggcggcctgag
aaggtcagctcagaaaagatgggcctgcagactggcagcccccggcacaagacggagcgg
ccagaagggaccaagaaaaagccatcttcagccacgccagtggccagctcagggaaaggg
aggcctgaccgcccagggcggcagccgagccccactagtgggggcccccggccccaggac
tctcgtcccagtccccaccagccgcccgacaggaagggcagcaggaagacgccatcgggg
aagctggtggagcgcaaggcccgctcactggacgagggtgcctctcaggaggcccccaag
ctgaagaagcgggccttaagccacgcggagctcttcggggatgagagcgaggatgagggc
ccagggcctggggccctgcaggtcttgccccctgccctccccagcctcagctctgactca
gaatctgactcggactccagcctgggcttccctgccccgcagctgcccaagcgtctcaag
gcctccccgcccccatcccctgtgccctcctcctcctcctcctcctcaggggctggggag
ggtacagaggaggacgtggactactcggccctggagaaggaggtcgactttgactccgac
cccatggaggagtgcctgcggattttcaacgagtccaccaacgtgaagacggaggacaag
ggccggctggcccggcagccccctgaggacgggaggagtgaggagaaggggcgtgcaggc
ctgaccaccttgttcccagggcagaagaggagaatctcgcatctttctaagcagggcaag
gaggcggagcccccgaggaggggcccagcggtgctcccagcccggcccccaactgcccag
gaggtgtgctacaggcgggcccagcagatgcagagggagtcggccagctggctgcaggct
gccccacggccagccgaaaagccctcctccgtccacattgctgcacctggcgagaaaagg
aggatcgcccacatccccaaccccctcttagccgcggcccccacaggtgccaagaggacc
ctctcggccagcagcagccaggcctcccatggccctgagcctggcagccagccgctgaag
actcgcacgctgtcagggatggcgtccaagaccaccaccaccatcacccccaagcgcgtc
gctcacagtccatctctacagagtctaaagaaacccattatcccaaaagagtttgggggc
aaggtccccaccgtcatccgccaacgctatctcaacctgtttatcgaggagtgtctcaaa
ttctgctcatccaaccaggaggccatagagaaggcgctgaatgaggagaaggtggcctat
gaccgcagccccagcaagaatatctacctgaatgtcgccgtgaacacactcaagaagctc
aggggcctggtccccagcactgtgcccggtctcagtaaagccagtggccggagggttgtg
tcccacgaagtggtcctaggggggaagttggctgccaagaccagcttctcactcagccgc
cccagcagtccccgggtggaggacctaaaaggggccgccctctacagccgcctcagggac
tacctgctcaccccggagcagctgcaggagaatggctaccctttcccccaccctgagcgg
cccgggggcgccgtcatcctcacggccgaggagaagaagcccaaggacccctcctgcaga
atctgctgccgctgtggcgccgagtacctggtgtcctcctctggccgctgcgtccgtgag
gaggagtgccactaccactgggggcggctgcggcggagccgagtggccgggggctgggag
acgcagtacatgtgctgctcggccgccgtcggctccgttggctgtcaggtcgcaaagcaa
cacgtgcaggacggccggaaggaaaacctggaaggcttcgtgaggaccttcgagaaggag
ctttcggaagacacccacgcggggatctacgccctggactgcgagatgtcctacaccacg
tatggcctggagctgacgcgcgtcacggtggtggacacggagctgcgtgtggtgtacgac
accttcgtcaagcccgacaacgagatcgtggactacaacaccaggttttcaggggtgaca
gaggctgacctcgcggacacgagcatcacgctgcgggatgtccaggctgtcctgttgagc
atgttcagcgccgacaccatcctcattggacacagcctggagagtgacctgctagccttg
aaggtcatccacagcaccgtggtggacacatctgtgctgttccctcaccgcctgggcctc
ccctacaagcgctccctgcggaacctcatggccgactacctcagacagatcatccaggac
aacgtggacgggcacagctccagcgaggacgccagcgcctgcatgcacctagtgatctgg
aagatccgagaagacgccaagaccaagcgatga
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