Sciurus carolinensis (gray squirrel): 124968409
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Entry
124968409 CDS
T08117
Name
(RefSeq) CLIP-associating protein 2-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124968409
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124968409
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124968409
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124968409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_DAAF5
Adaptin_N
Sec7-like_HUS
RTP1_C1
MMS19_C
TAN
PPP2R1A-like_HEAT
ParcG
FdsD
Motif
Other DBs
NCBI-GeneID:
124968409
NCBI-ProteinID:
XP_047386729
LinkDB
All DBs
Position
17:35005019..35197799
Genome browser
AA seq
1561 aa
AA seq
DB search
MEPRSMEYFSAQVLQKDVGSRLQVGQELLLYLGAPGAIPDLGDDLSRLGKTVDALTGWVG
SSNYRVSLMGLEILSAFVDRLSTRFKSYVAMVIVALIDRLGDAKDRVRDEAQALILKLMD
QVAPPMYVWEQLASGFKHKNFRSREGVCLCLIETLNTFGAQPLAISKLVPHLCILFGDSN
TQVRDAAILAIVEIYKHVGEKVRIDLYERGIPPARLERIFAKFDEVYNSGGILNICKDKS
FDDEESVDGNRPSSAASAFKVPAPKTSGNPVNSARKPGSAGGPKVGAGASKEGGAGAVDE
DDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQY
DCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVP
NSAKVMATSGCAAIRFIIRHTHVPRLIPLITSNCTSKSVPVRRRSFEFLDLLLQEWQTHS
LERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTY
LKSSGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSSVAGRVSAGSNKASSLPGSLQR
SRSDIDVNAAAGAKAHHAAGQSVRSGRLGAGALNPGSYASLEDTSDKMDGTASEDGRVRA
KLSAPLAGMGNAKTDSRGRSRTKMVSQSQRSSSPDKNEAGSRSGSPGRVLTTTALSTVSS
GVQRVLVNSASTQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRESSR
DTSPVRSFQPLASRHHSRSTGALYAPDVYGASGPGYGISQSSRLSSSVSAMRVLNTGSDV
EEAVADALLLGDIRTKKKPARRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMR
QTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKR
VFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPN
DLQFNILMRFTVDQTQTPSLKTVKPALRDHLHSFWSSKVKVAILKYIETLAKQMDPGDFI
NSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATK
LLHNHLRNTGNGTQSSMGSPLTRPTPRSPANWSSPLTSPTNTSQNTLSPSAFDYDTENMN
SEDIYSSLRGVTEAIQNFSFRSQEDMNEPLKRDSKKDDGDSMCGGPAMSDPRAGGDATDS
SQTTLDNKASLLHPMPVHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLS
LDHSDLVAELLKELSNHNERVEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGD
KEPTIRALALKVLREILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATS
ISPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNSE
SSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRAQTGSGGADPTTDVSGQ
S
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgcagcatggagtacttcagcgcccaggtgctgcagaaggacgtgggcagc
cggctgcaggtgggccaggagctcctgctgtacctcggtgcccctggcgccattccggac
ctgggggacgacctgagtcgcctgggcaagaccgtggacgcgctcaccggctgggtgggc
tcgagcaactaccgggtatcattaatgggattggaaattttaagtgcctttgtggacaga
ttatcaacacgatttaaatcctatgtagcaatggttattgtagctttaatagacagattg
ggagatgccaaagacagagttcgagatgaagctcaggctctgatattgaagttaatggat
caagttgcaccacccatgtatgtttgggaacagttggcttctggttttaagcacaagaat
tttcgatctcgagaaggagtgtgtctatgtcttattgaaaccttgaacacttttggggct
cagccactagccatcagcaagttggtaccacatttgtgtatcctatttggtgattccaat
actcaggtgagagatgctgcaatattggctatagtggagatttacaaacatgttggagag
aaagtgaggattgatctttatgagagaggaatcccccctgctagattagaaaggatattt
gccaaatttgatgaagtatacaattcgggcggtatattgaatatctgcaaagataaaagc
tttgatgatgaggaatcagtggatggaaataggccatcatcagctgcttcagccttcaag
gttcctgcacctaaaacatccggaaatcctgtcaacagtgcaaggaagcctggttcagca
ggtggccctaaggttggagcaggtgcttcaaaagaaggaggtgctggagcagttgatgaa
gatgattttataaaagcttttacagatgtcccctctattcagatctattctagtcgagaa
cttgaagaaacattaaataaaatcagggaaattttgtcagatgacaaacatgactgggat
caacgtgccaatgcacttaagaaaattcgatcactgcttgttgctggagctgcacagtat
gattgcttttttcaacatttacgtttgttggatggcgctcttaaactatcagctaaggat
cttagatcccaggttgttcgagaagcttgcattactgtagcccatctttcaacagttttg
ggaaacaagtttgatcatggggctgaagccattgtacctacactttttaaccttgtcccc
aatagtgcaaaagtcatggcaacttctggatgtgcagcaatcagattcatcattcggcat
actcatgtacccagacttatccctttaataacaagcaattgcacatcaaaatcagttcct
gtaaggaggcgttcatttgaatttttagatttgttgttgcaagagtggcagactcattcg
ttggaaagacatgcagctgtcttggttgaaactataaagaaaggaattcatgatgctgat
gctgaggccagagtggaggcaagaaagacatatatgggcctcagaaaccactttcctggt
gaagctgaaactttatataattcccttgagccatcttatcagaaaagtcttcaaacttac
ttaaagagttctggcagtgtagcatctcttccacaatcagacagatcctcatctagctca
caagaaagtctgaatcgccctttttcttctaaatggtctacagcaaatccatcaagtgtg
gctggaagagtatcagcaggcagcaacaaagccagttcccttccaggaagcctgcagcgt
tctcgaagtgacattgatgtgaatgctgctgctggtgccaaggcacatcatgctgctgga
caatctgtgcgaagtgggcggttaggtgcaggtgccttgaatccaggttcctatgcatca
ttggaggatacttctgacaagatggatggaacagcatctgaagatggccgtgtgagggca
aagctttcagcaccacttgctggcatgggaaatgccaagacagattctagaggaagaagt
cgaacaaaaatggtgtctcagtcacagcgttcatcatcacctgacaaaaatgaagctggc
agccgatctgggtctccaggaagagttttgaccacaacagccctctctactgtgagctct
ggtgttcaaagagtcctggtcaattcagcctccacacagaaaagaagcaagataccaagg
agccagggctgtagcagagaggctagtccatctaggctttcagtagctcgaagcagtcgt
attcctcgaccaagtgtgagtcaaggatgcagccgggaagctagtcgggagagtagtagg
gacactagtcctgttcgctcttttcagcccctcgcctccagacaccattccagatctact
ggtgccctctacgcccccgatgtgtatggggcctcaggtccaggttatggaatcagccag
tcaagtcgactgtcatcttctgtcagtgccatgagagtcctgaacacaggttctgacgtg
gaggaggcagtagcagatgccttgctcttaggagacatacggactaagaaaaaacctgct
cgaagaagatatgaatcatatggaatgcattcagatgatgatgccaacagtgatgcttct
agtgcttgttcagaacgctcctacagttctcgaaatggtagtattcctacttatatgagg
cagacagaagatgtggcagaagtcctcaatagatgtgctagttccaattggtcagaaagg
aaagaaggccttctgggactgcagaacttattaaaaaatcagagaacactaagtcgagtt
gaactgaaaagattatgtgaaatttttacaagaatgtttgctgatcctcatggcaagaga
gtattcagcatgtttttggagactctagtagacttcatacaagtccacaaagatgatctt
caagactggttatttgtactgctgacacagctacttaaaaaaatgggtgctgatttgctt
gggtctgttcaggcaaaagttcagaaagccctagatgttacaagagaatcttttccaaat
gatcttcagtttaatattttaatgagatttacagttgatcagactcaaacaccaagcctg
aagacagtcaagccagcacttcgggaccatcttcactctttttggagctccaaggtaaag
gttgccatccttaaatacatagaaactctggccaaacaaatggatccaggagattttata
aattccagtgaaactcgcctggcagtgtctagggtcatcacttggactacagaacccaaa
agttctgatgttcggaaggcagcacaatcagtgctgatttctttatttgaactcaatacc
ccagagtttacaatgttactaggagctttaccaaaaacttttcaagatggtgctaccaaa
cttcttcataatcaccttcgaaacactggcaatggaacccagagttccatggggagtcct
ttgacaagaccaacaccacgatcaccagccaactggtccagtcctcttacttctcctacc
aatacatcacaaaatactttatcgccaagtgcatttgattatgacacagaaaatatgaac
tctgaagatatttatagctctcttagaggtgtcactgaagcaatccaaaatttcagcttc
cgtagtcaagaagacatgaatgagccattgaaaagggattctaaaaaggacgatggtgat
tcaatgtgtggtggtcctgcgatgtcagacccaagagcaggaggtgatgctactgactca
agccaaacaactcttgataataaagcttcgttgctccacccgatgcctgttcactcctct
ccacgctctcgagactataatccctataactattcagatagcatcagtcccttcaacaag
tctgccctcaaggaagccatgtttgatgatgacgctgaccagtttcctgatgatctttcc
ctagaccattctgacctagttgccgagttgttgaaggagctgtccaaccataatgaacgt
gtagaagaaagaaaaattgccctctatgaactcatgaaactaacacaggaagaatctttc
agtgtttgggatgaacacttcaaaacaatattgcttttattgcttgaaacccttggtgat
aaagagcctacaatcagggctttggcattaaaggttttaagagaaatcttaaggcatcaa
ccagcaagatttaaaaactatgcagaactgactgtcatgaaaacattggaagcacacaaa
gatcctcataaagaagtggtgagatctgctgaggaagctgcatcagtattggctacttcc
attagtccagagcagtgcatcaaagtactttgtcctatcatccaaactgcagattaccca
attaatctggctgcaatcaaaatgcaaacaaaagtgatagaaagagtatccaaggaaact
cttaatctgcttttgccagagattatgccaggcttaatacagggttatgataattcggag
agcagtgttcggaaagcttgtgtcttctgccttgtagctgttcatgcggtaattggtgat
gaactgaaaccacatctcagtcagctcactggcagtaaaatgaagctactgaatctttac
atcaagcgtgcacaaacaggttctggaggagctgatcccactactgacgtttctggacaa
agttag
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integrated database retrieval system
