Sciurus carolinensis (gray squirrel): 124968461
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Entry
124968461 CDS
T08117
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
ncar04120
Ubiquitin mediated proteolysis
ncar04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124968461
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124968461
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
124968461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124968461
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124968461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_Vps41
Ge1_WD40
Beta-prop_SPT8
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
124968461
NCBI-ProteinID:
XP_047386900
LinkDB
All DBs
Position
17:1911656..1929530
Genome browser
AA seq
493 aa
AA seq
DB search
MDQDYERRLLRQIVIQNENTMPCVSEMRRTLTPASSPVSSPSKHGDRFIPSRAGANWSVN
FHRINENDKSPSQNRKAKDATSDSGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPS
TPEKKGLFTYSLSTKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLD
APELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSER
GNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRT
PPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKA
IAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGY
SQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTK
ESVSVLNLFTRIR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggactatgagcggcggctgctccgtcagatcgtcatccagaacgagaacacg
atgccttgtgtctcagagatgcgacgcaccctgacacccgccagctccccggtgtcctcc
cccagcaagcacggggaccgcttcatcccctcacgtgccggggccaactggagcgtgaac
ttccacaggatcaacgagaacgacaagtctcccagccagaaccgcaaagccaaagacgcc
acctcggacagcggcaaagacggcctggcctactcagccctgctgaagaacgagctgctg
ggagcgggcatcgagaaggtgcaggacccgcagaccgaagaccgcaggctgcagccctcc
acgccggagaagaagggcctcttcacgtattccctcagcaccaagcgctcgagcccggac
gatggcaacgacgtgtccccgtactccttgtctcccgtcagcaacaaaagtcagaagtta
ctccggtctccgcggaaacccacccgcaagatctccaaaatccccttcaaggtcctggat
gctcctgagctgcaggacgacttctacttgaacctggtggactggtcgtccctgaacgtg
ctcagcgtggggctgggcacctgtgtgtacctgtggagcgcgtgcaccagccaggtgacg
cggctctgcgacctctccgtggaaggggactctgtgacctccgtgggctggtctgagcgg
gggaacttggtggccgttgggacacacaagggctttgtgcagatctgggacgctgctgcg
gggaagaagctgtccatgctggaaggccacacggcacgcgtgggggccctggcctggaac
gctgaccagctgtcctccgggagccgggaccgcatgatcctgcagcgggacatccgcact
ccacccctgcagtcggagcggcggctgcaaggtcaccggcaggaggtgtgcggactcaag
tggtccacggaccaccagctactcgcctctgggggcaacgacaacaagctgctagtctgg
aaccactcgagcttgagtcccgtgcagcagtacacggagcacctggcagctgtgaaggcc
atcgcctggtccccacaccagcacggcctgctggcttcgggcgggggcacggccgaccgc
tgcatccgcttctggaacacgctcacggggcagccgctgcagtgcatcgacacgggctcc
caggtgtgcaacctggcctggtccaagcacgccaacgagctggtgagcacccacggctac
tcccagaaccagatcctcgtgtggaagtacccgtccctgacccaggtggccaagctcact
gggcactcctaccgcgtcctctacctggcaatgtcccctgacggggaggccatcgtcact
ggtgctggagacgagaccctgaggttctggaatgtcttcagcaaaacccgctcgaccaag
gagtccgtgtctgtgctcaacctcttcacccggatccggtag
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