KEGG   Sciurus carolinensis (gray squirrel): 124968512
Entry
124968512         CDS       T08117                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03018  RNA degradation
ncar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124968512
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124968512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124968512
   03041 Spliceosome [BR:ncar03041]
    124968512
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124968512
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     124968512
Spliceosome [BR:ncar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    124968512
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 124968512
NCBI-ProteinID: XP_047386991
LinkDB
Position
17:complement(21957168..21970473)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcgctgctgaagacggctcagaaccatcccatgttggtggagctcaaa
aatggggagacatacaatgggcacctggtgagctgtgacaactggatgaacattaacctg
cgggaggtgatctgcacttccagggacggggacaagttctggcggatgcctgagtgctac
attcgaggcagcaccatcaagtacctgcgcatccctgacgagatcattgacatggtgaag
gaggaggtggtggccaagggccggggccgtggtggcctgcagcagcagaagcagcagaaa
ggccgaggcatggggggcgctgggcgaggtgtgttcggtggccggggccgaggtgggatc
cctggcacgggcagaggccaacctgagaagaagccaggccggcaggcgggcaagcagtga

DBGET integrated database retrieval system