Sciurus carolinensis (gray squirrel): 124968564
Help
Entry
124968564 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124968564
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124968564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TFIIA
DUF3452
Med3
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
124968564
NCBI-ProteinID:
XP_047387107
LinkDB
All DBs
Position
17:49183982..49720765
Genome browser
AA seq
821 aa
AA seq
DB search
MYHSLSETRHPLQPEEQEVGIDPLSSYSNKSGGDSNKNGRRTSSTLDSEGTFNSYRKEWE
ELFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVIPQDKSQWISRIKELRVWYSNIK
EVHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVRRTFPEMQFFQQE
NVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFILHCDHQAFLHASESAQPSEEMKTL
LNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMPPIPFARPQDLGPTVAIVTK
VNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGL
SLSLVDYIFIAMLLYIRDALISSNYQTCLGLLMHYPLIGDVHSLILKALFLRDPKKNPRP
VTYQFHPNLDYYKARGADLMNKSRTNTKGAPLNINKVSNSLINFGRKLISPAMAPGSVGG
PIPGGNSGSSSSAAIPTRTSADTPRHHLQQQQQQQQQQQQQQQQQRLMKSESMPVQLNKG
DIVTGSDAQVSVPVQTLTDLQGQSSKNISSSPSIESLPGGREFTGSPPSSATXKDSFFSN
ISRSRSHSKTMGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLVNIQDVILQEN
LEKEDQILVSLAGLKQIKDILKGSLRFNQSQLEAEENEQITIADDHYCSSGQGQGNQVLG
SAKQASAEAPGLPDRGGSDDFILVSKEDEGGSAKGHFPGQAQPLRTLKSTSGKSRTLACS
PLVFSDPLMGPASASSSNPSSSPDDDSSKDSGFTIVSPLDI
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattccttatctgaaactagacatcctctgcagcctgaagaacaagaagtaggc
attgaccccttgtccagttattcaaacaagtctggaggagattcaaataaaaatggaaga
agaacaagttctaccttagactctgaggggacttttaattcatataggaaagaatgggaa
gaactatttgtaaacaacaattacttggcaacaataaggcagaaagggattaatgggcag
ctgagaagcagcaggttccgcagcatttgctggaagctgtttctttgtgttattcctcaa
gataaaagtcaatggataagtagaattaaagagttaagagtatggtatagcaacattaaa
gaagtacatatcacaaaccccaggaaggttgttggccaacaagatttgatgatcaacaat
cctctttcacaggatgaagggagtctttggaataaattcttccaagataaagaactacga
tcaatgattgaacaagatgttagaagaacgtttcccgaaatgcagtttttccaacaagaa
aatgtgagaaagattcttacagatgttcttttctgttatgctagagaaaatgagcagttg
ctttataaacagggaatgcatgagctattagcccccatagtcttcatccttcactgtgac
caccaagcctttctacatgccagtgagtctgcacagccaagtgaggaaatgaaaactctc
ttgaaccccgagtatctggagcatgatgcttatgcaatgttctcacaactgatggaaact
gctgaaccttggttttctacttttgagcatgatggtcaaaaggggaaagaaactctgatg
cctcccatcccctttgcccgaccacaggatttaggaccaacagttgctattgttactaaa
gtcaaccagatccaggatcatctactgaagaagcatgatattgagctctatatgcacttg
aacaggctggaaattgcaccacagatatatggattgcggtgggtgcggttgctgtttggc
agagagttccctctgcaggatctcctggtggtctgggatgccttgtttgcagatggcctc
agcctgagtttagtcgactatatcttcatagccatgttactctacattcgggatgctttg
atctctagtaactaccagacctgtcttggccttctgatgcattacccactcatcggagat
gtgcactcactgattcttaaggctttgttccttagagacccaaagaaaaatccaagacct
gtgacttatcaattccatcccaatctagattattacaaagcacggggagcagaccttatg
aacaaaagccggaccaataccaaaggtgctcccctgaatataaataaggtctctaatagc
ctgattaattttggaagaaagctgatttccccagcaatggccccaggcagtgtgggtggc
cctatccctgggggcaacagtggcagctcctcttctgctgctatccccaccaggacctca
gcagacaccccaaggcatcatttgcagcaacagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcggctgatgaaatccgaaagcatgccagtgcaattgaacaaaggc
gatatagttacaggaagcgatgctcaggtttctgttcctgtccagactctaactgacctc
caagggcaaagttctaaaaacatcagttcatctccaagcattgagagtttgcctggagga
agagaattcactggttccccaccttcatctgctactnaaaaagattccttttttagcaac
atctcccggtcacgctcacacagcaaaactatgggcagaaaagaatctgaagaagaatta
gaagcccagatttccttccttcaaggacagttgaatgacctggatgctatgtgtaaatac
tgtgcaaaggtgatggacactcatcttgtaaatattcaagatgtgatattacaagaaaat
ttggaaaaagaagatcaaattctggtttccctggcaggattaaaacagatcaaagacatt
ctaaaaggttccctgcgtttcaaccagagccaactggaagctgaagagaatgagcagatt
accatcgcagatgaccactactgctccagcggccagggtcagggcaaccaagttctcgga
tccgccaagcaggcttctgcagaagctcctgggctcccagacagagggggctctgatgac
ttcatcctggtttcgaaagaagatgaagggggcagtgccaaggggcacttcccgggtcag
gctcagcctcttcgcaccctcaaaagtacatcggggaaaagccggaccctggcctgctct
cccttggtgttctcagatcccctgatgggtcccgcctcagcatcttccagcaaccccagc
tccagccctgatgacgacagcagcaaggactccggcttcaccattgtgagccccctggac
atctga
DBGET
integrated database retrieval system
