Sciurus carolinensis (gray squirrel): 124968613
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Entry
124968613 CDS
T08117
Name
(RefSeq) transcriptional repressor p66-alpha isoform X1
KO
K23194
transcriptional repressor p66
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124968613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124968613
03036 Chromosome and associated proteins [BR:
ncar03036
]
124968613
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124968613
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
124968613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
Motif
Other DBs
NCBI-GeneID:
124968613
NCBI-ProteinID:
XP_047387180
EnsemblRapid:
ENSSCRG00010020313
LinkDB
All DBs
Position
17:22792168..22899042
Genome browser
AA seq
666 aa
AA seq
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MPLTPSFGLYLNFEQFRMTEEACRTRSQKRALELDPIEDDVESKKMKMERGSSASDLNSD
GDTRVTPEPGAGPAQGLLRAAEATVMSRGDGLVSDGPVDMRTSHRTSLEVLLEWWWVHDM
KSERRPPSPDVIVLSDNEQPLSPRVNGLTKMALKETSTEALLKSSPEERERMIKQLKEEL
RLEEAKLVLLKKLRQSQIQKETTTQKPTGSTGSTVTTPPPLVRGTQNLPAGKTSLQTSST
RMPGSVIPPPLVRGGQQVSSKLGPQASSQVVMPPLVRGAQQIHNIRQHSTTGPPPLLLAP
RASVPSVQIQGQRIIQQGLIRVANVPNTSLLVNLPQPTPASLKGTTAASAQASSTPTSVA
SVVTSGESPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEE
VVQNLLETQAGRMSAAAAAAVLSQEPYMCAQCKTDFTCRWREEKGGAIMCENCMTSNQKK
ALKVEHTSRLKAAFVKALQQEQEIEQRLLQQGTAPTTTTKAEPTAAPHLALKQVIKPRRK
LAFRSGEARDWSNGAVLQASSQLSRGSTTTPRGVLHTFSQSPKLQNTASATALVSRTGRH
SERAAGAAKGSATSNWKKTPLSTGGTLAFVSPSLAVHKTSSAVDRQREYLLDMIPPRSIP
QSATWK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgccacttaccccatcctttggcttatacttgaactttgagcagttcagaatgactgag
gaagcatgccgaacacgaagtcagaaacgagctcttgaactggaccctatagaggatgat
gtagagagcaagaaaatgaaaatggagagaggatcgtcagcttcagacttaaactctgat
ggagatacaagggtgacacctgagccaggagcaggtccagcccaaggattgctgagggca
gcagaagccacagtgatgagcagaggtgatggactggtgagcgacgggccagtggatatg
cgtacctcacacaggacttctctggaagtgcttcttgaatggtggtgggtacatgacatg
aagtctgaaaggagaccaccctcgcctgatgtgattgtgctctctgacaatgagcaacct
ttaagcccacgggtgaatggattgaccaagatggccttgaaggagaccagcactgaggcc
ctcctgaaaagcagtcctgaagaacgagaaagaatgattaagcaactgaaagaagagttg
agattagaagaagcaaagcttgttttgttgaaaaagttgcggcagagtcaaatacaaaaa
gaaaccaccacccagaagcccacgggctccactgggagcactgtgactacccctccccca
cttgtgcgaggcacccagaaccttcctgctggcaagacatcgcttcagacctcttcaact
cgaatgcctggcagtgtcatcccgccacccctggtccgtggcgggcagcaggtgtcttct
aagctggggccacaggcgagctcacaggtcgtcatgcccccactcgtcaggggggcccag
caaatccacaacatccgacaacattccaccacgggcccaccgcctctccttctggccccc
cgggcctctgtacccagcgtgcaaattcagggacagagaatcatccagcagggactcatt
cgtgtcgccaacgtccccaacaccagtctgcttgtcaacctcccacagcccaccccagca
tcactgaaggggacaacagctgcctctgctcaggccagctccacccctaccagcgtggcc
tctgtggttacttctggtgagtctccagccagccggcaggcagctgccaagcttgcacta
cgcaaacagctggagaagacactgctggagatccccccacccaaacccccggccccagag
atgaacttcctgcctagtgctgccaacaatgagttcatctacctggttggcctggaggag
gtggtgcagaacctactggagacacaagcagggaggatgtcggctgcggcagccgccgct
gtactatcccaggagccctacatgtgtgcacagtgcaagacagacttcacatgccgctgg
cgggaggaaaagggcggggccatcatgtgtgagaactgcatgacatccaaccagaagaag
gcactcaaggtggagcataccagccgcctgaaggccgccttcgtgaaggcgctgcaacag
gagcaggagattgagcagcgcctgctgcagcagggcacggcccccaccaccaccaccaag
gctgagcccactgctgccccccacctggctctgaagcaggtcataaaaccccggcgtaag
ttggcgttccgctcaggagaggcccgagactggagtaacggggctgtgctacaggcctcc
agtcagctgtcccgaggctcaaccacaacgccccgtggtgtactgcacacattcagccag
tcacccaaactgcagaacacagcctcggccacggccctagtcagcaggactggcagacat
tccgagagagctgcaggtgctgccaagggcagtgccacctccaactggaagaaaacgccc
ctgagcacaggcgggaccctggcatttgtcagcccaagtttggcagttcataagacgtcc
tccgctgtggaccgccagcgagaatacctcctcgacatgatcccaccacgctccatcccc
cagtcggccacgtggaaatag
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