Sciurus carolinensis (gray squirrel): 124968647
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Entry
124968647 CDS
T08117
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124968647
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124968647
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_5
Ig_2
LRR_LRWD1
LRRNT
V-set
LRR_9
LRR_6
Sp38
Motif
Other DBs
NCBI-GeneID:
124968647
NCBI-ProteinID:
XP_047387270
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Position
17:complement(1156657..1170848)
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AA seq
592 aa
AA seq
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MTCWLRVLSLHLLLLPAAPPPAGGCPARCECAAQTRAVVCARRRLTAVPDGVPAETRVLE
LSRNRIRCLNPGDLAALPALEELDLSQNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPG
VFTRLENLTLLDLSENRLVILLDYTFQDLHSLRRLEVGDNDLVFISRRAFAGLLALEELT
LERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFRKLPGLLHLEIDNWPLLEDVAA
GSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH
LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL
LWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQHVTAT
AGDDVRFLCRAEGEPAPTVAWVTPQHRAVTAASAGRARVLPGGTLEILDARPQDSGTYTC
VASNAGGNDTYFATLTVQPAPAANRTLGEGRNETQVAARFPLDLTAILVSTAMGCITFLG
VVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctgctggctgcgcgtgctgagcctgcacctgctgctgctgcccgcggcgccgccc
ccggccgggggctgcccggcccgctgcgagtgcgccgcccagacgcgcgccgtggtctgc
gcgcgccgccgcctgaccgccgtgcccgacggcgtcccggccgagacgcgcgtgctggag
ctcagccgcaaccgcatccgctgcctgaatcccggagacctggccgcgctgcccgcgctg
gaggagctggacctgagccagaacgtcatcgcgcacgtggagcccggcgccttcgccaac
ctgccgcgcctgcgcgtcctgcgtctccgcggcaaccagctgaaactcatcccgcccggg
gtcttcacgcgcctggagaacctcacgctgctggatctgagcgagaacaggctggtcatc
ctgctagactacaccttccaggacctgcacagcctccgcaggctcgaggtgggcgacaac
gacctggtgttcatctcgcgccgggccttcgcggggctgctggccctggaggagctgacc
ctggagcgctgcaacctcacggcactgtccggagagtcgctgggccatctgcggggcctg
ggcgccctgcggctgcgacacctggccatcgccgccctggaggaccagaacttccggaag
cttcccgggctgctgcacctggagatcgacaactggcccctgctggaggacgtggccgcc
ggcagcctgcggggcctcaacctgacctcgctctccgtcacccacaccaatatcaccgcg
gtgccggccgccgcgctgcggcaccaggcacatctgacctgcctcaacctgtcccacaac
cccatcagcacggtgccccgagggtcctttcgggacctagtccgcctgcgggagctgcac
ctggccggggccctgctggcggtggtggagccgcaggccttcctgggcctgcgacagatc
cgcctgctgaacctgtccaacaacctgctgtccacgctggaggagagcaccttccactcg
gtcaacacgctggagacgctgcgcgtggacgggaacccgctggcctgtgactgccgcctg
ctctggatcgtgcagcgtcgcaagaccctcaacttcgacgggcgcctgccggcctgcgcc
accccggccgaggtgcgcggcgacgcgctgcgcaacctgcccgactccgtgctcttcgag
tacttcgtctgccgcaagcccaagatccgcgagcgccggctgcagcacgtcaccgccacc
gcgggcgacgacgtccgcttcctctgccgcgccgagggcgagccggcgcccaccgtggcc
tgggtgaccccgcagcaccgcgcggtgacggccgccagcgccggccgggcgcgcgtgctg
ccggggggcacgctggagatcctggacgcgcggccgcaggacagcgggacctacacgtgc
gtggccagcaacgcgggcggcaacgacacctacttcgccacgctgacggtgcagcccgcg
ccggccgccaaccggaccctgggcgagggccgcaacgagacacaggtggcggcgcgcttc
ccgctggacctcaccgccattctggtgtccacggccatggggtgcatcacgttcctgggc
gtggtgcttttctgcttcctgctgctcttcgtgtggagccggggccgcgggcagcacaag
aacaacttctcggtggagtactccttccgtaaggtggacggtccggccgccgccgcgggc
cagggcggcgcgcgcaagttcaacatgaagatgatttga
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