Sciurus carolinensis (gray squirrel): 124968654
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Entry
124968654 CDS
T08117
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03018
RNA degradation
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124968654
09123 Folding, sorting and degradation
03018 RNA degradation
124968654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124968654
03041 Spliceosome [BR:
ncar03041
]
124968654
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124968654
mRNA degradation factors
5'-3' decay
Lsm complex
124968654
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124968654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124968654
NCBI-ProteinID:
XP_047387283
LinkDB
All DBs
Position
17:complement(1176302..1183233)
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagagaagaagaaaaaggagagcatcttggacctgtccaagtacatcgac
aagaccatccgagtgaaattccagggaggccgcgaagccagcggcatcctcaagggcttc
gacccgctgctgaacctcgtgctggacggcaccatcgagtacatgcgagaccctgacgac
cagtacaagctgactgaggacacgcgccagctgggcctggtggtctgccgcggcacctcg
gtggtgctcatctgcccgcaggacggcatggaggccatccccaaccccttcatccagcag
caggacgcctag
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integrated database retrieval system
