Sciurus carolinensis (gray squirrel): 124968675
Help
Entry
124968675 CDS
T08117
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04020
Calcium signaling pathway
ncar04024
cAMP signaling pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04724
Glutamatergic synapse
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05030
Cocaine addiction
ncar05031
Amphetamine addiction
ncar05033
Nicotine addiction
ncar05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124968675
04024 cAMP signaling pathway
124968675
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124968675
04082 Neuroactive ligand signaling
124968675
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
124968675
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124968675
05020 Prion disease
124968675
09165 Substance dependence
05030 Cocaine addiction
124968675
05031 Amphetamine addiction
124968675
05033 Nicotine addiction
124968675
05034 Alcoholism
124968675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124968675
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Glutamate (ionotropic)
124968675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124968675
NCBI-ProteinID:
XP_047387317
LinkDB
All DBs
Position
17:200637..207547
Genome browser
AA seq
1030 aa
AA seq
DB search
MELVRALWFVLALGLATGSARGHPQPCGVLARLGGSVRLGALLPRAPVARARVRAALARA
ALAPPLPHNLSLELVAAAPPARDPASLARGLCQALASPGVSALLAFPEARPELLQLHFLA
AATETPVLSVLRREARAPLGAPTPFHLQLDWASPPETLLDVLVSLLQAHRWEDVSLVLCR
VRDPAGLVALWTSRAGRAPRLLLDLSRPDVGDVGLRTRLAPLGLPVGGGSPVPVAVLLGC
DATRAPRVLQAAPPGPHWLLGTPLPAEALPTAGLPPGLLALGEVARPSLEATIHDAVELV
ARALGSAALVQPERALLPAEVNCEDQQPAGPESPGRFLARFLANTSFQGRTGPVWVTSTS
QVHLSRTFKVWSLRRDPLGAPAWATVGTWRDGQLDLEPGGAVSRPLLPTGSQARPKLRVV
TLVEHPFVFAREPDEDGQCPAGQLCLDPGTNDSAVLDALFAALANGSVPRALRKCCYGYC
VDLLERLAEDVPFDFQLYIVGDGKYGALRDGRWTGLVGDLRAGRAHMAVTSFSINSARSQ
VMDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWSMWLGVFAALHLTALFLTLYEWRSP
YGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLLVLSSY
TANLAAVMVGDKTFEELSGIHDPKLHHPPQGFRFGTVWESSAEAYIKASFPEMHAHMRHH
GAPTTPDGVAMLTSEPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQN
SPLTSNLSEFISRYKSSGFIDLLHAKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCL
GLGSALLSSLCEHVFFRLVLPRIRRGSRLQYWLHTSQKIHRALNTERREGQRERLDPEPS
GAGKQEQDTSAYHEGPGRWKRVRRAVGKERRVRFLLEPGVAAAQEAAEAEPGTPEGPVWM
CSNGPPPTAMPVASPRAGELEELERHIEGVRERLRQALVRRGELLARLGDGARHRPLRLL
QVQAAPEDAR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtgcgggcgctgtggttcgtcctggcgctggggctggcaacggggtccgcc
cgcggccacccacagccctgtggcgtcctggcgcgcctcgggggctccgtgcgcctgggc
gccctcctgccccgcgcgcccgttgcccgcgcccgcgtccgcgccgcgctggcccgggct
gccctggcgccgccgctgccgcacaacctcagcctggagctggtggccgccgcgccccct
gcccgcgaccccgcctcgctggcccgtggcctgtgccaggcgctggcctcgccgggcgtg
tcggccttgctggctttccccgaggcgcgacccgagctgctgcagctgcacttcctggcg
gctgccaccgagaccccggtgctcagcgtgctgcggcgggaggcgcgcgcgcccctcggc
gccccgaccccgttccatctgcagctggactgggccagccccccggagacgctgctggac
gtgctggtgtccctgctgcaggcccaccgctgggaggacgtcagcctggtgctctgccgt
gtccgcgaccccgccggcctggtggctctctggacaagccgggctggccgggcaccgagg
ctcctgctggacctgagccggccagacgtgggggatgtggggctgcgcacacgcctggcc
ccgctggggttgcctgtgggaggtgggtccccggtcccggtggccgtcctcctcggctgt
gatgccacccgcgcccctcgggtgctgcaggccgcaccgcctgggccccattggctgctg
ggcactccactgcctgccgaggccctgcccacggctggcctgccacctgggctgctggca
ctgggtgaggtggcccggccctcactggaggccaccatccatgatgcagtggagctggtg
gcccgagcgctgggcagcgcggctctcgtgcagccagagcgggcgctcctcccggccgag
gtgaactgcgaggaccagcagccggctggaccagagtcccccgggcgcttcttggctcgg
ttcctggccaatacgtctttccagggccgcacggggcccgtgtgggtgaccagcacatcg
caggtgcacctgtctcggaccttcaaggtgtggagccttcgccgggacccactaggcgcc
ccggcctgggccacggtgggcacctggcgggatgggcagctggacttggagccagggggc
gctgtgtctcggcccctcctcccaacaggctcccaggcccgacccaagttgcgcgtggtg
acgctggtggagcacccgttcgtgtttgcccgcgagcccgacgaagacgggcagtgccca
gcagggcagctgtgcctggaccccggcaccaacgactcggctgtcctggacgctcttttt
gccgcactggccaatggctcggtgccccgcgccctgcgcaagtgctgctatggctactgc
gtcgacctgctggagcggctggccgaggatgtgcccttcgacttccagctgtacatcgtg
ggtgacggcaaatatggcgccctgcgggacggccgctggacgggcctggtgggcgacctg
cgggctggcagggcccacatggcggtcaccagcttcagcatcaactcagcccgctcgcag
gtcatggacttcaccagccccttcttctccaccagcctgggcatcatggtgcgggcacgg
gacacagcctcacccatcggggccttcatgtggccgctgcactggtccatgtggctgggg
gtcttcgcggccctgcacctcaccgcgctctttctcaccctgtatgagtggcgcagcccc
tacggactcacaccccgcggccgcaaccggggcaccgtgttctcctactcctccgccctc
aacctctgctacgccattctttttggacgcaccgtctccagcaagacccccaagtgcccc
accgggcgcttcctcatgaacctctgggccatcttctgcctgctggtgctgtccagctac
acggccaacctggctgcagtcatggtcggggacaagacctttgaggagctgtcagggatc
cacgaccccaagctgcaccacccgccgcagggcttccgcttcggcacggtgtgggagagc
agcgccgaggcctacatcaaggccagcttccccgagatgcacgcgcacatgcggcaccac
ggcgcgcccaccacgcccgacggcgtggccatgctcacgagcgagcctcccaagctcaac
gccttcatcatggacaagtcactcctggattacgaggtctccatcgacgcggactgcaaa
ctgctgaccgtgggcaaaccctttgccatcgagggctacggcatcggactaccccagaac
tcgccgctcacctccaacctgtccgagttcatcagccgctacaagtcctcgggtttcatc
gacttgctccatgccaagtggtacaagatggtaccttgcgggaagcgggtgttcgcggtt
acagagaccctccagatgggaatctaccacttctcgggtctcttcgtgctgctctgcctg
ggactgggcagcgccctgctcagctcgctgtgcgagcacgtcttcttccgcctagtgctg
ccgcgcatccgcaggggcagtaggctgcagtactggctgcacaccagccagaaaattcac
cgggccctcaacacggaacggcgggaagggcaaagagagaggctggatccagagcccagt
ggtgccgggaagcaggagcaggacacctccgcgtaccatgagggcccagggcgttggaaa
cgagtgcgcagggccgtgggcaaggagcgcagagtgcgctttctcctggagccaggggtg
gctgccgcccaagaagcggcggaggcagagcctggaacccctgaaggtccagtctggatg
tgttccaacgggcccccgcccactgcgatgccggtggcctctccgcgcgccggcgagctg
gaggagctggagcggcacatcgagggcgtccgcgagaggctccgtcaagctctggtgcgg
cgcggggagctcctggctcgacttggggatggcgctcgccaccggccactgcgcctgctg
caggtccaagcggcacctgaggatgcccggtga
DBGET
integrated database retrieval system
