Sciurus carolinensis (gray squirrel): 124968720
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Entry
124968720 CDS
T08117
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04145
Phagosome
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04820
Cytoskeleton in muscle cells
ncar05144
Malaria
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124968720
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124968720
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124968720
09144 Cellular community - eukaryotes
04510 Focal adhesion
124968720
09142 Cell motility
04820 Cytoskeleton in muscle cells
124968720
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124968720
09174 Infectious disease: parasitic
05144 Malaria
124968720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124968720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124968720
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124968720
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Phagocytosis
Opsonins
124968720
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124968720
Exosomal proteins of colorectal cancer cells
124968720
Exosomal proteins of bladder cancer cells
124968720
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124968720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
GREB1_2nd
Motif
Other DBs
NCBI-GeneID:
124968720
NCBI-ProteinID:
XP_047387394
LinkDB
All DBs
Position
17:complement(22325923..22332986)
Genome browser
AA seq
756 aa
AA seq
DB search
MAPSTACVLLLTLSALGVSGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEIT
FLKNTVMECDACGMQPARTPGLSVRPLSYCASGSCFPGVACTETASGARCGPCPAGFTGN
GSHCTDVNECNAHPCFPRVRCINTSPGFRCEACPPGYSGPAHEGVGLAFAKANKQVCTDI
NECETGQHNCVPNSVCINTRGSFQCGPCQPGFVGDQASGCQRRAQRFCPDGSPSPCHEKA
DCVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQE
DVDRDGIGDACDPDADGDGVPNEEDNCPLVRNADQRNADSDKWGDACDNCRSQKNDDQKD
TDRDGRGDACDDDIDGDRIRNSADNCPRVPNSDQKDSDGDGVGDACDNCPQKDNPDQSDV
DHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGQGDACDDDDDNDRVPDSR
DNCRLVPNPGQEDADRDGVGDACQGDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIF
GYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTE
SQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGR
LGVFCFSQENIIWANLRYRCNDTIPEDYEAQRLRRA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggccccttccaccgcctgtgttctcctactcactctgtcggccctcggcgtgtccggc
cagggccagattccactaggcggagacctggccccgcagatgctgcgcgagctgcaggag
accaacgcagcgctgcaggacgtgcgggagctgttgcggcagcaggtcaaggagatcaca
ttcctgaaaaacaccgtgatggagtgcgacgcgtgcgggatgcagccggcgcgcactccc
ggcttgagcgtgcggcctctgtcctactgcgcgtccggctcctgcttcccaggcgtggcc
tgcaccgagacggcgagtggcgcgcgctgtggcccctgccccgcgggcttcacaggcaac
ggctcgcactgtaccgacgttaatgagtgcaacgcccacccctgctttccccgcgtccgc
tgcatcaacaccagcccggggttccgctgcgaggcttgtccgcccgggtacagcggcccc
gcccacgagggcgtgggactggccttcgccaaggccaacaagcaggtgtgcacggatatt
aatgagtgtgagaccgggcagcacaactgcgttcccaactctgtgtgcatcaacaccagg
ggctccttccagtgtggcccgtgccagcccggcttcgtaggcgatcaggcatctggctgc
cagcggcgcgcgcaacgcttctgccccgacggatcgcccagcccatgccacgagaaggct
gactgtgtcctggagcgcgacggctcacggtcctgcgtgtgcgcggtcggctgggctggc
aatggactcctctgtggccgggacactgacctggacggcttccctgacgaaaaactgcgc
tgctccgagcgccaatgccgcaaggacaactgcgtgaccgtgcccaactcagggcaggag
gacgtggaccgcgatggcatcggagacgcctgcgaccctgatgccgatggggacggggtc
cccaacgaggaggacaactgcccgctggtgcggaacgcagaccaacgcaacgcggacagt
gacaagtggggcgatgcatgcgacaactgccggtcccagaagaatgacgaccagaaggac
acagaccgggacggtcggggcgacgcctgcgacgacgacatcgacggagaccggatccga
aactcagcagacaactgtcccagggtgcccaactcagaccaaaaggacagtgatggtgac
ggtgtaggggatgcctgtgataactgccctcagaaggacaacccagaccagagtgatgtg
gatcacgattttgtaggagatgcttgtgatagcgaccaagaccaggatggggatggacac
caagactcccgggacaactgccccacagtacccaacagtgcccagcaagactcagaccac
gacggtcagggtgatgcctgtgatgatgatgacgacaatgatagagttcctgatagtagg
gacaactgtcgcctagtacctaacccaggccaggaggacgcagacagggacggtgtgggt
gacgcgtgccagggtgattttgacgcggacaaggtggtagacaagattgatgtgtgtccg
gagaacgccgaggtcaccctcaccgacttccgcgccttccagactgtcgtgctggacccc
gagggagatgcgcaaattgaccccaactgggtagtgctcaatcaggggatggagatcgtg
cagacaatgaacagcgacccaggcctggctgtgggatacacggccttcaacggcgtggac
ttcgagggcacgttccacgtgaacacagccaccgatgacgattacgcgggtttcatcttc
ggttaccaggacagctcgagtttctacgtggtcatgtggaaacagatggaacaaacatac
tggcaggcgaaccccttccgtgctgtggccgagccaggcatccagctcaaggctgtgaag
tcttccacaggccccggggagcagttacggaatgcattgtggcacacaggggacactgag
tcacaggtgcggctgctgtggaaggacccccgtaacgtgggctggaaggacaagacatcc
taccgctggttcctgcagcaccgacctcaagtgggctacatcagggtgaggttctacgag
ggacccgagctggtggctgacagcaacgtggtcctggacacaaccatgaggggcggtcgc
ctgggggtcttctgcttctcccaggagaacatcatctgggccaacctgcgctaccgctgc
aacgacaccatccccgaggactacgaggcacagcggctgcggcgggcctag
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