KEGG   Sciurus carolinensis (gray squirrel): 124968760
Entry
124968760         CDS       T08117                                 
Name
(RefSeq) neurogenic locus notch homolog protein 3 isoform X1
  KO
K20995  Notch 3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar01522  Endocrine resistance
ncar04330  Notch signaling pathway
ncar04371  Apelin signaling pathway
ncar04658  Th1 and Th2 cell differentiation
ncar04919  Thyroid hormone signaling pathway
ncar05165  Human papillomavirus infection
ncar05200  Pathways in cancer
ncar05206  MicroRNAs in cancer
ncar05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124968760
   04371 Apelin signaling pathway
    124968760
 09150 Organismal Systems
  09151 Immune system
   04658 Th1 and Th2 cell differentiation
    124968760
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    124968760
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124968760
   05206 MicroRNAs in cancer
    124968760
  09162 Cancer: specific types
   05224 Breast cancer
    124968760
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124968760
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    124968760
SSDB
Motif
Pfam: EGF hEGF EGF_TEN EGF_CA Ank_2 Ank Notch EGF_2 NODP Ank_4 NOD Ank_3 Ank_5 EGF_3 EGF_Teneurin cEGF
Other DBs
NCBI-GeneID: 124968760
NCBI-ProteinID: XP_047387455
LinkDB
Position
17:complement(19249730..19285635)
AA seq 2325 aa
MGPGARGRRRRRRLMSLPPPPSPVRALPLLLLLAGPGAAAPPCLDGSPCANGGRCTQLPS
REAACLCPPGWVGERCQLEDPCHSGPCAGRGVCQSSVVAGTARFSCRCPRGFRGPDCSLP
DPCLSSPCAHGARCSVGSDGRFVCSCPPGYQGRSCRSDIDECRVGGPCRHGGTCLNTPGS
FHCQCPGGYTGPLCESPTVPCAPSPCRNGGTCRQNGDLTYDCACLPGFEGQNCEVNVDDC
PGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNTLGGHSC
VCVNGWTGESCSQNIDDCATAVCFHGATCHDRVASFYCACPMGKTGLLCHLDDACVSNPC
HEDAICDTNPVNGRAICTCPPGFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCG
RGYTGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFTGTYCEVDIDECQSSPCVN
GGVCKDRVNGFSCACPSGFSGSTCQLDVDECASTPCRNGAKCVDQPDGYECRCAEGFEGT
LCEHNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHGGKCLDL
VDKYLCRCPPGTTGVNCEVNIDDCASNPCTFGVCRDGINRYDCVCQPGFTGPLCNVEINE
CASSPCGEGGSCVDGENGFSCLCPPGSLPPLCLPPSHPCAHEPCSHGLCHDAPGGFRCVC
EPGWSGPRCSQSLARDACESQPCGAGGTCISDGMGFHCTCPPGVQGRQCELLSPCSPNPC
EHGGRCESAPGQLTVCSCPPGWQGPRCQQDVDECAGPSPCGPHGSCTNLVGSFSCTCHGG
YTGPSCDQDINDCDPNPCLNGGSCQDSVGSFSCSCLPGFAGPRCAHDVDECLSSPCGPGT
CTDHVASFTCTCPPGYGGFHCEKDLPNCSPSSCFNGGTCVDGVNSFSCLCRPGYVGAHCQ
YEADPCLSRPCLHGGVCSATHPGFHCACREGFAGSQCQTLVDWCSHEPCQNGGRCVQNGA
YCLCPPGWSGRLCDIRSLPCREAAAQIGVRLEQLCQAGGQCVDQDSSHYCVCPEGRTGSY
CEHEVDPCLAQPCQHGGTCRGYMGGYMCECPAGYSGDDCEDDVDECASQPCQHGGSCIDL
VDRYLCSCPPGTLGVLCEINEDDCGPGPPLDSGPRCLNNGTCVDLVGGFRCNCPPGYTGL
HCEADINECRPGACHAAHTRDCLQDPGGHFRCLCHAGFTGPRCQTVLSPCESQPCQHGGQ
CRPSPGPGGGLTFTCHCVQPFWGPRCEQVARSCRELQCPVGVPCQQTARGPRCACPPGLS
GPSCRGSRGSPPGAANATCAAVACLHGGSCRAAPLAPFFRCMCAPGWSGPRCETPAAAPE
ISEEPRCPRAACQAKRGDKRCDRECNSPGCGWDGGDCSLSVGDPWRQCEALQCWRLFNNS
RCDPACSSPACLYDNFDCHTGGRERTCNPVYEKYCADHFADGRCDQGCNTEECGWDGLDC
ASEVPALLARGVLVLTVLLPPEELLRSSADFLQRLSAILRTSLRFRLDAHGQAMVFPYHR
PSPGSELRTRRELAPEVIGSVVMLEIDNRLCLQSPENDHCFPDAQSAADYLGALSAVERL
DFPYPLRDVRGEPMELPEPSVPLLPLLAAGAVFLLVILVLGVMVARRKREHSTLWFPEGF
ALHKDVAAGHKGRREPVGQDALGMKPHRNMAKSESLIGEVATDWMDTECPEAKRLKVEEP
GMGAEEPVDCRQWTQHHLVAADIRVAPAMALTPPQGDADADGMDVNVRGPDGFTPLMLAS
FCGGALEPMPAEEDEADDTSASIISDLICQGAQLGARTDRTGETALHLAARYARADAAKR
LLDAGADTNAQDHSGRTPLHTAVTADAQGVFQILIRNRSTDLDARMADGSTALILAARLA
VEGMVEELIASHADVNAVDELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEETPLF
LAAREGSFEAAKLLLDHFANREITDHLDRLPRDVAQERLHQDIVRLLDQPSGPRSPPGPH
GLGPLLCPPGAFLPGLKAAQPGAKKSRRPPGKAGLGPQGARGRGKKLTLACPGPLAESSV
TLSPVDSLDSPRPFGGPPASPGGFPLEGPYATATATAVSLAQLGGTGRAGPLGRQPPGGC
VLSLGLLNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQMLNPGTPVSPQERPPPYLAAPG
HGEEYPAAGAHSSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSDSTPSPATA
TGTAATAAGALPAQPHSLSIPSSLAQAQTQLGPQPEVTPKRQVLA
NT seq 6978 nt   +upstreamnt  +downstreamnt
atggggccgggggcccggggccgccgccgccgccgccgcctgatgtccctgccaccgcca
ccatcgcctgtgcgcgcgctgcccctgctgctgctgctagcggggccgggggctgcagcc
cccccttgcctggacggaagcccgtgtgcaaatggaggtcgttgcacccagctgccctcc
cgggaggctgcctgcctgtgcccaccaggctgggtgggtgagcgatgccaactggaagac
ccctgccactcaggtccctgtgctggtcgtggtgtctgccagagctcggtggtggcaggc
actgcccggttctcctgccgatgcccccgtggcttccgaggcccagactgctccctgccg
gatccctgcctcagcagcccttgtgcccatggtgcccgctgctcagtggggtctgatggc
cgcttcgtctgctcctgcccacccggctaccagggccgcagctgccgcagcgacattgat
gagtgccgggtgggggggccttgccgccatggcggcacctgccttaacacacctggctcc
ttccactgccaatgcccagggggctacacagggccactatgtgagagccccacagtgccc
tgtgctccttcgccgtgccgcaatgggggcacctgtaggcagaatggcgacctcacctat
gactgtgcctgccttcctgggtttgagggccagaactgtgaagtgaacgtggatgactgt
ccaggacaccgatgtctaaatggggggacatgtgtggatggtgtcaacacctacaactgc
cagtgccctcctgagtggacaggccaattctgcacggaagatgtggatgagtgtcagctg
cagcccaatgcctgccacaatgggggcacctgcttcaacaccttgggtggccacagctgt
gtgtgtgtcaatggctggacaggagagagctgcagtcagaacatcgatgactgtgccaca
gctgtctgcttccatggggccacctgccatgaccgtgtggcttccttctactgcgcctgt
cccatgggcaagactggccttttgtgtcatctggatgatgcctgtgttagcaacccgtgt
cacgaggatgctatctgtgacacaaaccccgtgaatggccgggccatctgcacctgtcca
cccggcttcactggtggggcctgcgatcaggatgtggatgaatgctccattggcgccaac
ccgtgtgaacatctaggtcggtgtgtgaacacgcagggatccttcttgtgccagtgtggt
cgcggttacactggacctcgctgtgagaccgacgtcaatgagtgtctgtcagggccctgc
cgcaatcaggccacctgcctggaccgtattggccagttcacctgcatctgtatggcaggc
ttcacaggaacctactgtgaggtggacattgatgaatgtcagagtagcccatgtgtcaac
ggtggtgtttgcaaagaccgagtcaatggcttcagctgtgcctgcccttcgggcttcagt
gggtccacttgccagctggacgtggatgaatgcgcaagcacgccctgcaggaacggcgcc
aagtgcgtggaccagcctgacggctacgagtgtcgctgtgcagaagggttcgagggcacg
ctgtgcgagcacaatgtggacgactgctctccggatccgtgccaccatggacgctgcgtg
gatggcattgctagtttttcatgtgcctgtgccccagggtacacaggcacgcgctgcgag
agtcaggtggacgagtgccgcagtcaaccctgccgccatgggggcaaatgcctagacctg
gtggacaaatatctttgtcgctgtcctcccggcaccacaggcgtgaattgtgaggtcaac
atagatgattgtgccagcaacccctgcacctttggagtctgccgtgatggcatcaaccgc
tatgattgtgtctgccaaccgggcttcacagggcccctttgcaacgtggagatcaatgag
tgtgcatccagcccctgcggtgagggaggctcctgcgtggatggggaaaatggcttcagc
tgcctctgcccacctggctccttgcctccactctgcctcccgccaagccatccctgtgct
cacgagccctgcagtcatggcctctgccatgatgcgcctggcgggttccgctgtgtgtgt
gagcccggctggagtggcccccgttgcagccagagtctggctcgagatgcctgtgagtct
cagccctgtggggctggtggtacctgcatcagcgatggaatgggcttccactgtacctgt
cccccaggagtccagggccgtcagtgtgagctgctgtccccctgctccccaaacccctgt
gagcatgggggccgctgtgagtctgctccaggtcagctgactgtctgctcctgcccccca
ggctggcaaggcccacgatgccagcaagatgtggacgagtgtgccggcccctcaccctgc
ggcccccatggttcctgcaccaacctggtgggaagttttagctgtacctgtcacgggggt
tacactggtccttcctgcgatcaggacatcaatgattgtgaccccaacccgtgcctcaat
ggtggctcctgtcaggacagcgtgggctccttttcctgctcttgccttcctggcttcgct
ggcccacgctgcgcccatgatgtggatgagtgtctgagcagcccctgtggccctggcacc
tgcaccgaccacgtggcctccttcacctgcacctgcccaccaggctatggaggcttccat
tgtgagaaagacctgcccaactgcagccccagttcctgcttcaatggagggacctgtgtg
gacggtgtgaactcattcagctgtctgtgtcgcccgggctacgtgggtgcccactgccaa
tatgaggccgatccttgcctctcccggccatgtctgcacgggggcgtctgcagcgccacc
caccctggcttccactgtgcctgtcgggagggcttcgccggcagccagtgccagaccctg
gtagactggtgcagccatgagccctgtcagaatgggggtcgctgtgttcagaatggggcc
tattgcctttgtccccctggatggagtggacgactctgtgacatccgaagcctgccctgc
agagaggccgcagcccagattggggtgcggctggagcagctgtgtcaggcaggtgggcag
tgcgtggaccaggacagctcccattactgcgtgtgcccagagggacgcaccggcagctac
tgtgagcatgaagtggacccctgcttggcccagccctgccagcatggaggcacctgccgt
ggctacatgggaggctacatgtgtgagtgtccagctggctattctggtgacgactgtgag
gacgatgtggatgaatgtgcctcccagccatgtcagcatgggggctcctgcattgacctt
gtggaccgatatctctgctcctgtccccctgggacgctgggtgtgctctgtgagattaat
gaggatgactgtggccctggtccccccctggactcaggccctcggtgcctaaacaatggc
acttgtgtagatttggtgggtggcttccgctgcaactgccccccaggatacactggcctg
cactgtgaagcagacattaatgagtgtcgtccaggtgcctgccatgcagcacacacccgg
gactgcctgcaagacccaggtgggcacttccgctgcctttgccatgctggcttcacaggt
ccccgctgtcagactgtcctgtctccctgtgagtctcagccatgccaacatggaggccag
tgccgtcccagcccaggccctgggggtgggctgaccttcacctgccactgtgtccagccg
ttctggggtcctcgttgtgaacaagttgcacgctcctgccgggagctgcagtgccctgtg
ggtgtcccatgccagcagacagcccgcggacctcgctgcgcctgtcccccagggttgtcg
gggccctcctgccgtggatccagggggtcgcctccgggggctgccaacgccacctgcgca
gctgttgcctgtctccacgggggctcctgtcgcgctgcaccgcttgctcccttcttccga
tgcatgtgcgctccgggctggagcggcccgcgctgtgagacccccgcagccgcgcccgag
atctccgaggagccgcgttgcccgagggccgcctgccaggccaagcgcggggataagcgc
tgcgaccgcgagtgcaacagcccgggctgcggctgggacggtggcgactgctcgttgagc
gtcggagacccctggcgacagtgcgaggcgctgcagtgctggcgtctcttcaacaacagc
cgctgtgaccctgcctgcagctcacctgcctgcctctatgacaacttcgactgccacacc
ggtggccgggagcgaacctgcaacccagtgtatgagaagtactgcgctgaccactttgct
gatggccgctgtgaccagggctgcaacactgaggagtgtggctgggacgggctggactgt
gctagtgaggtgccggcactgctggcccgcggcgtgctggtcctcacagtgctgctgcct
ccggaagagctgctgcgctccagcgcagacttcctgcagcgacttagcgccatcctgcgc
acttctctgcgcttccgcctggacgcgcacggccaggccatggtcttcccgtaccaccga
ccaagtcctggttcagaattacggacccggagggagctggcccctgaggtgatcggctct
gtagtgatgctggagattgacaatcggctctgcctgcagtcgcctgagaatgaccactgt
ttccccgatgcccagagcgcagccgactacctgggggccttgtcggccgtggagcgtctg
gacttcccgtacccgctgcgggatgtgcgaggggagccgatggagcttcctgagccaagc
gtgccgctgctgccactgctggccgcgggtgctgtcttcctgctggtcattctcgtcctg
ggcgtcatggtggcccggcgcaagcgtgagcacagcaccctctggttccctgagggcttt
gcactacacaaggacgtcgcagcaggccacaagggccggcgggagcctgtgggacaagat
gcactgggaatgaagccccacaggaacatggccaagagtgagagtctgatcggggaggtg
gccacagactggatggacacagagtgcccagaggccaagcgactgaaggtagaagagcct
ggtatgggggctgaggagcctgtggattgtcgccagtggacccaacaccacctggttgcc
gctgacatccgtgtagcaccagccatggcactgacaccaccgcagggagatgcagatgct
gatggcatggatgtcaacgtgcgtggcccagatggtttcaccccactcatgctggcctcc
ttctgtgggggggccctggagccgatgcccgctgaggaggatgaggccgatgacacatca
gccagcatcatctcagacctgatctgccagggggcccagctaggggcccggacagatcgt
acgggcgagacagctctgcacctggctgcccgctatgcccgggcagacgcggccaagcgg
ctgttggatgctggggcagacacgaatgcccaggaccactcgggtcgcacccctttgcac
acagctgtcactgctgacgcccagggtgtcttccagattctcatcaggaaccgctccaca
gacctggacgcccgcatggcagatggctcgactgcactgatcctggcggcccgcctggca
gtggaaggcatggtggaagagctcatcgccagccacgccgatgtcaatgctgtggatgag
ctaggaaaatcagccttacattgggctgcagctgtgaacaatgtggaggccaccttggct
ctgctgaaaaatggagccaacaaggacatgcaggatagcaaggaggagaccccgctgttc
ctggctgcccgggaaggcagcttcgaggctgccaagctactgctggaccactttgccaat
cgggagatcacagaccacctggacaggctgccccgggatgtggcccaggagcggctgcac
caggacatcgtgcggttgctggaccagcccagtgggccgcgcagcccccctggcccccat
ggcttggggcccctgctctgcccacctggggcctttctcccaggcctcaaggcggcacaa
cccggagccaagaagagcaggaggccccccgggaaggcagggctagggccgcaaggggcc
cggggccggggcaaaaagctgacgctggcctgcccaggtcccctggccgagagctccgtc
acactgtcaccggtggactcactggactccccgcggcccttcggtgggccccctgcttcc
cctggaggcttcccccttgagggtccctatgcgactgccacggccactgcagtgtccttg
gcgcagcttggtggcacaggccgggcaggccccctagggcgccagcctcctggaggctgt
gtgcttagcctgggtctgctgaacccggtggctgtccccctcgactgggcccggctgcct
ccacctgcccctccagggccctcattcctgctgccccttgcaccgggaccccagatgctc
aaccctgggacccccgtctctccccaggagcgacccccaccctacctggcagccccagga
catggcgaggaatacccggcagcgggggcccacagcagccccccgaaagctcgcttctta
cgtgtccccagtgaacacccttacctgacaccctccccagagtcccccgagcactgggcc
agcccttctcccccctccctctcggactggtccgattctacacccagcccggccactgcc
acggggacggctgccacggccgctggggcgctgcctgcccagccacactccttgtccatc
cccagctcccttgctcaggcccagacccagctggggccccagccagaagtcacccctaag
aggcaggtgttggcctga

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