Sciurus carolinensis (gray squirrel): 124969060
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Entry
124969060 CDS
T08117
Name
(RefSeq) SURP and G-patch domain-containing protein 1
KO
K13096
splicing factor 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124969060
Spliceosome [BR:
ncar03041
]
Complex A
Other components
Complex A specific factors
124969060
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GFIT
Motif
Pfam:
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124969060
NCBI-ProteinID:
XP_047387830
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Position
17:complement(22707780..22737645)
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AA seq
645 aa
AA seq
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MSLKMDNRDVAGKANRWFGVAPPKSGKMNMNILHQEELIAQKKREIEAKMEQKAKQNQVS
SPQPPHPGEIANAHNSSCISNKFANDGSFLQQFLKLQKAQTSTDPPPSTTSAPPSTPTPS
TGKRPLLLSKRSGLGLGSPLGQVKNYSHAKQLPVAHRPSVFQSPDEEEEEDYEQWLEIKV
SPPEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE
IRKEAQKSQATSQKVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYE
PNSQGYKYYRQKLEEFRKAKAGSTGTLTAPDPSLKRKSLPEVPSGSLPPATTCPASSSPA
PTTTPAPTVPGKPPSTTTVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKG
LGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKALQQHQ
HGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMET
FKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVD
GAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaagatggacaaccgggatgttgcaggaaaggctaaccgatggtttggggtt
gctccccccaagtctggaaagatgaacatgaacattcttcaccaggaagagctcattgct
cagaagaaacgggaaattgaagccaaaatggaacagaaagccaagcagaatcaggtgtcc
agccctcaacctccacatcctggcgaaattgcaaatgcacacaactcttcctgcatttcc
aacaagttcgccaatgatggcagcttcttgcagcagtttctgaaattgcagaaggcacag
accagcacagacccgccccctagcacgaccagcgctcctcccagcacacccacccccagc
accgggaagaggcccctcctgctcagcaagcggtcgggcctgggactaggcagcccactt
ggccaggtgaagaactactcacatgccaagcagctccctgtggcacaccggccaagtgtc
ttccagtctcctgatgaggaggaggaggaggactacgagcagtggctggaaatcaaagtt
tcacccccagagggagccgagactcggaaagtgatagagaaattggcccgctttgtggca
gaaggaggccctgagttagaaaaagtagctatggaagactacaaggataacccagcattt
gcatttttacatgataagaatagcagggaattcctttactacagaaagaaagtggctgag
ataagaaaggaagcacaaaagtcacaggcaacctctcagaaagtttcacccccagaggat
gaagaggccaagaaccttgcagaaaagttggccaggttcatagcagatgggggtcctgaa
gtagaaactatcgctcttcagaacaaccgtgagaaccaggcattcagctttctatatgaa
cccaacagtcaagggtacaaatattaccggcaaaagctggaggagttccggaaagccaag
gcaggctccacaggcaccctcacagcacctgaccccagcctgaagcgcaagtcccttcct
gaggtcccatcagggtccttgcctccagccactacctgccctgcctcatcttcccctgca
cccaccaccaccccagctccaactgtccctggtaagccaccctccacaaccactgtgaag
aggaagcggaagagccggtggggacctgaagaggacaaggttgagttgccacctgctgag
ctggtgcagagggatgtggatgcctctccttcacctctgtcagttcaggacctcaagggg
cttggctatgagaaggggaagcctgtaggtctggtgggtgtcacagaactctcagatgcc
cagaaaaaacagctgaaggagcagcaggagatgcaacagatgtatgacatgatcatgcaa
cacaagcgggcaatgcaggacatgcagctgctgtgggagaaggcactccagcaacaccag
catggctatgacagcgacgaggaggtagacagcgagctgggtacctgggagcaccagctg
cggcgcatggagatggacaagacacgggagtgggcagagcagctgacaaagatgggccgg
ggcaaacacttcattggagacttcctgccccctgatgagctggaaaagttcatggagaca
ttcaaggccctaaaggagggtcgagagcctgactactcagagtacaaggagttcaagctg
actgtggagaacatcggttaccagatgctgatgaagatgggctggaaggagggcgagggg
ctgggctcagagggtcagggcatcaagaacccagtgaacaagggcaccaccacggtagat
ggtgctggttttggcattgaccgaccagctgagctctccaaggaggacgacgaatatgag
gccttccgcaagaggatgatgttggcataccgcttccggcccaatcccctgaacaacccc
agaaggccttactactga
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