Sciurus carolinensis (gray squirrel): 124969140
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Entry
124969140 CDS
T08117
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04260
Cardiac muscle contraction
ncar04261
Adrenergic signaling in cardiomyocytes
ncar04921
Oxytocin signaling pathway
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124969140
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
124969140
09153 Circulatory system
04260 Cardiac muscle contraction
124969140
04261 Adrenergic signaling in cardiomyocytes
124969140
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124969140
05412 Arrhythmogenic right ventricular cardiomyopathy
124969140
05414 Dilated cardiomyopathy
124969140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124969140
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124969140
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
124969140
NCBI-ProteinID:
XP_047387927
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Position
17:complement(54097596..54983449)
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AA seq
1090 aa
AA seq
DB search
MAGSGSQRRASRGASALLAAALLYAALGDVVRSEQQIPLSVVKLWASAFGGEIKSIAAKY
SGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKH
EFDADLQYEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYN
KDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKWEPDENGVIAFD
CRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEE
LHYVEPCLNGTLVQADRTNKEHFREHLDKLFAKGIGMLDIALNEAFNILSDFNHTGQGSI
CSQAIMLITDGAVDTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLKWMACANKGFFTQ
ISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYMDSTLPQAQKLADDQGPVLMTTVA
MPVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELR
PLYEEGKKRRKPNYSSVDLSEVEWEDRDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVM
TNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTIEEGLHDLEHPDVSLADEWSYCNTDL
HPEHRHLSQLDAIKLYLKGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSD
KGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGS
FVYSIPFSTGTVNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCAA
LDGKCSISCDDETVNCYLIDNNGFILVSEDYMQTGDFFGEVEGAVMNKLLTMGSFKRITL
YDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFLVEFNLCSWWHSDMTAKAQ
KLKQTLEPCDTEYPAFVSERTIKETTGNIACEDCSKSFVIQQIPSSNLFMVVVDSSCLCE
SVAPITMAPIEIRYNESLKCERLKAQKIRRRPESCHGFHPEENARECGGAPSLQAQTTLL
LPLLSILFLR
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtcgggctctcagcgccgcgcgtcccggggggcctcggcgctcctggccgcc
gcgcttctctacgccgcgctgggggatgtggtgcgctcggagcagcagatcccgctctcc
gtggtgaagctgtgggcctccgcttttggtggagagataaaatccatcgctgctaagtac
tccggttcccagcttctgcaaaagaaatacaaagagtatgagaaagatgttgctatagaa
gaaatcgatggcctccaactggtgaaaaagttggcaaaaaacatggaggagatgtttcac
aagaagtcggaagcagtacggcgtcttgtagaagcggcggaagaggcacacctgaagcat
gaatttgatgcagacttacagtatgaatacttcaatgccgtgctgatcaatgaaagggac
aaagacgggaactttttggaactggggaaggaattcatcttagctccaaatgaccacttt
aataatttgcctgtgaacatcagtctgagtgacgtccaagtgccaacgaacatgtacaac
aaagatcctgccatcgtcaatggggtttactggtccgaatccctaaacaaagtgtttgta
gataactttgaccgtgacccatctctcatatggcagtactttggaagtgccaagggcttt
tttagacagtatccagggattaaatgggaaccagatgagaatggagtcattgcctttgac
tgcaggaaccgaaaatggtacatccaggcagcgacttctccaaaagatgtggtcatctta
gttgacgtcagcggtagcatgaaaggactccgtctgactatcgccaagcaaacagtttca
tccatcttggataccctgggggatgatgacttcttcaacatcattgcttataatgaggag
cttcactacgtggaaccctgcctgaatggaactttggtgcaagccgacaggaccaacaag
gagcacttcagggagcatctggacaagctttttgccaaaggaattggaatgctggatata
gctctgaacgaggccttcaacattctcagcgatttcaaccatacgggacaaggaagtatc
tgcagccaggccatcatgctcatcaccgatggggcggtggacacctatgataccattttt
gcaaaatacaactggccggaccgaaaggttcgcatcttcacctacctcattggacgagag
gctgcctttgcagacaatctcaagtggatggcctgtgccaacaaagggtttttcacccag
atctccaccttggctgatgtgcaggaaaatgtcatggaatacctccacgtgctcagcagg
cccaaagtcatcgaccaagagcacgacgtggtgtggactgaagcttacatggatagcacc
ctccctcaggctcaaaagcttgctgatgatcagggccctgtcctgatgaccacggtggcc
atgcccgtgtttagtaagcagaacgaaaccagatccaagggcattcttctgggtgtggtt
ggcacagatgtcccagtgaaagagctcttgaagaccatccccaaatacaagttggggatt
cacggttatgcctttgcaatcacaaataatggatatatcctgacacatccagaactcagg
cctctgtacgaagaaggcaagaagcgaaggaaaccgaattacagcagcgtggacctgtcc
gaggtggagtgggaagaccgagatgatgtgttaagaaacgccatggtgaatcgaaagacg
ggcaagttttctatggaggtgaagaagacagtggacaaagggaaacgggttttggtgatg
acaaatgactactattatacagacatcaagggtacccctttcagtttaggtgtggcgctc
tccagaggccatgggaagtatttctttcgggggaacgtgaccatcgaggaaggcctgcat
gatttggaacacccggatgtgtccttggcagacgaatggtcctactgcaacactgacctg
cacccagagcaccgtcacctatcgcagctagacgccatcaagctctacctcaaaggcaaa
gagcccctgctgcaatgtgataaagaattgatccaagaagttctttttgatgcagtggtg
agtgcccccattgaagcctactggaccagcctggccctcaacaaatctgaaaattccgac
aagggcgtagaggtggcttttctcggcacccgcacaggcctctcaagaatcaacctgttt
gttggggctgagcagctcaccaatcaggatttcctgaaagctggagacaaagagaacatt
tttaatgcagaccatttccctctctggtaccgaagagccgctgagcagataccagggagc
ttcgtctattccatcccgttcagcacagggacagtcaacaaaagcaatgtagtgacagca
agtacctccatccagctcctggatgagcggaaatcccccgtggtggcagctgtaggcatt
cagatgaaacttgagtttttccaaaggaagttctggactgccagcagacagtgtgccgct
ctggatggcaaatgctccattagctgcgatgacgagactgtgaactgttacctcatagac
aataatgggtttattctggtgtctgaagactacatgcagactggagacttttttggcgag
gtggagggggccgtgatgaacaaattgttaacaatgggctcctttaaaagaatcacgctt
tatgactaccaggccatgtgtagagccaacaaggagagcagcgatggcgcccatggcctc
ctggatccttataatgccttcctctctgctgtgaaatggatcatgacagaacttgtcttg
ttcctggtggaatttaacctctgcagttggtggcactctgatatgacagctaaagcccag
aaattaaaacagaccttggagccttgtgatactgaatatccagcatttgtctctgagcgc
accatcaaggagactactgggaatattgcttgtgaagactgctccaaatcctttgtcatc
cagcaaatcccaagcagcaatctgttcatggtggtggtagacagcagctgcctgtgtgag
tctgtggcccccatcaccatggcacccattgaaatcaggtataatgaatccctgaagtgt
gaacgtttaaaggctcagaagatcagaagacgtccggaatcttgccatggcttccatcct
gaggagaatgcgagggagtgtgggggtgcaccaagtctccaggcccagacaacccttctg
ctccctctgctttcaatactcttcttgaggtga
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