Sciurus carolinensis (gray squirrel): 124969163
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Entry
124969163 CDS
T08117
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124969163
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124969163
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124969163
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
124969163
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class II (U)
124969163
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124969163
Prokaryotic type
124969163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
HTH_11
MarR_2
tRNA-synt_2
tRNA_synthFbeta
DUF1204
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
124969163
NCBI-ProteinID:
XP_047387959
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All DBs
Position
17:15135466..15144629
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AA seq
507 aa
AA seq
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MADGPVAELLLQRLEAADGGLDSAEIATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKR
WELTAEGEEIAQEGSHEARVFRSIPPEGLAQGELMRLPSGKVGFSKAMSNKWIRVDKSAA
DGPRVFRVVDRVEDEVQRRLQLVQGGQAEKLGEKERSELRKRKLLTEVTLKTYWVSKGSA
FSTRISKQEAELSPEMISSGSWRDRPFKSYNFSARGVLPDSGHLHPLLKVRSQFRQIFLE
MGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTH
SQGGYGSQGYKYSWKLDEARKNLLRTHTTAASARALYRLAQKKPFTPAKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFSKLGLTQLRFKPAYNPYTEPSMEVF
SYHQGLKKWVEVGNSGIFRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPLCRLDTEPKPRQTQAA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtcctgtggcggagctgctgctgcagaggctggaggctgcagatggcggc
ctggacagcgcggagatcgcaacccagctgggcgtggagcaccaggcggtggtgggtgcg
gtgaagagcctgcaggctctaggcgaggtcattgaggctgagcttcgctctaccaagcgc
tgggagcttactgctgagggcgaggaaattgcccaggaaggcagtcatgaggcccgagtg
tttcgcagcatccccccagagggcctggcccagggcgagctcatgcgcctgcccagtggc
aaagtgggtttcagcaaggccatgtccaacaaatggatccgagtggacaagagcgcagct
gatgggccccgtgtgttccgagtggtggacagggtggaggacgaggtgcagcgacgactc
cagttggtccagggtgggcaggccgagaagctgggtgagaaggagaggagcgagctcagg
aagaggaagctgctgactgaagtgaccctgaagacttactgggtgagcaagggcagtgcc
ttcagcaccaggatctccaagcaggaggcagagctgagcccggagatgatctccagtggt
tcctggcgggaccggcccttcaagtcctacaacttctcggcccgcggcgtgctccctgac
agcggtcacctgcaccccctgctcaaggtccgctcccagttccgacagatcttcctggaa
atggggttcactgagatgccgactgacaatttcatcgagagttccttttggaacttcgac
gctctcttccagccccaacagcatccagcacgcgaccagcatgacaccttctttctacga
gatccagctgaagccctgcagctcccgatggactacgtgcagcgagtcaagcgaacccac
tctcagggcggctacggctcacaggggtataagtacagctggaagctggacgaggcacgg
aaaaatctgctgcgcacacacaccacagcggccagtgcccgggccctgtaccgcctcgcc
cagaagaaacccttcacaccagccaagtacttctccatcgaccgcgtgtttcggaatgag
accctggatgccacacacctggctgagttccaccagatcgagggagttgtggctgaccac
ggcctcaccctgggccacctcatgggtgtcctgcgggagttcttctccaagttgggtctt
acccagctgcgtttcaagcctgcctacaacccttacactgagcccagcatggaggtgttc
agctatcaccaaggcctgaagaagtgggtagaagtggggaactctgggatcttccgccct
gagatgcttctgcccatggggctccctgagaatgtgtcggtcatcgcctggggcctctcc
ctggagcgcccaacgatgatcaagtatggcatcaacaacatccgcgagctggtgggccac
aaggtgaatctgcagatggtgtacgacagtcccctgtgccgcttggacacggagccaaag
ccccgacagacccaggctgcgtga
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