Sciurus carolinensis (gray squirrel): 124969172
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Entry
124969172 CDS
T08117
Name
(RefSeq) calreticulin
KO
K08057
calreticulin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
ncar04145
Phagocytosis
ncar04148
Efferocytosis
ncar04612
Antigen processing and presentation
ncar05142
Chagas disease
ncar05163
Human cytomegalovirus infection
ncar05166
Human T-cell leukemia virus 1 infection
ncar05168
Herpes simplex virus 1 infection
ncar05169
Epstein-Barr virus infection
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124969172
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124969172
04148 Efferocytosis
124969172
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
124969172
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124969172
05170 Human immunodeficiency virus 1 infection
124969172
05168 Herpes simplex virus 1 infection
124969172
05163 Human cytomegalovirus infection
124969172
05169 Epstein-Barr virus infection
124969172
09174 Infectious disease: parasitic
05142 Chagas disease
124969172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124969172
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ncar04091
]
124969172
Chaperones and folding catalysts [BR:
ncar03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
124969172
Lectins [BR:
ncar04091
]
L-type lectins
124969172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
124969172
NCBI-ProteinID:
XP_047387974
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All DBs
Position
17:complement(15126628..15131017)
Genome browser
AA seq
417 aa
AA seq
DB search
MLLPVPLLLGFLGLAAATPSVYFKEQFLDGDEWTDRWIESKHKSDFGKFVLSSGKFYGDQ
EKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPDNLDQT
DMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNMLINKDIRCKDDEFTHLYTLIVRPDN
TYEVKIDNNPVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPE
HIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGIWIHPEIDNPEYY
PDANIYAYDNFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKEAEKQMKDK
QDEEQRLQEEEEDKKRKEEEEAEDKEDEEDKDEDEEDEEDKEEDEEEDATGQAKDEL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgctacctgtgccgctgctgcttggcttcctcggcctggccgccgccacgccctcc
gtgtactttaaggaacagtttctggacggagacgagtggaccgaccgctggatcgaatcc
aaacacaaatcagattttggcaaattcgtcctcagttccggcaagttctacggtgaccag
gagaaggataaagggctgcagaccagccaggatgcccgcttttatgccctgtcggccaga
ttcgaacctttcagcaacaagggccagacgctggtggtgcagttcactgtgaagcacgag
cagaacattgattgtgggggtggctatgtgaagctgtttcctgataatttggaccagacg
gacatgcatggagattcagaatacaacatcatgtttggcccagacatttgtggccctggc
accaaaaaggttcatgtcattttcaattacaagggcaagaacatgctgatcaacaaggac
atccggtgcaaggatgatgaattcacacacctctacacactgattgtacggcctgacaac
acttatgaggtgaagattgacaataacccggtggaatcaggctccttggaggatgattgg
gacttcctgccacccaagaaaataaaggatcctgatgcttccaagccagaagactgggat
gagcgtgcaaagattgatgaccccacagactccaaacctgaggactgggacaaacctgag
cacatccctgaccctgatgctaagaagcccgaggactgggatgaagagatggatggagag
tgggaaccaccagttattcagaaccctgaatacaagggtgagtggaagccacgccagatt
gacaacccagattacaagggcatatggatccacccagaaattgacaaccctgaatattac
cctgatgccaatatctatgcttatgataactttgctgtgctgggcctagatctctggcag
gtcaagtctggcaccatttttgacaatttcctcatcaccaatgacgaggcatatgcagag
gagtttggcaatgagacatggggtgtcacaaaggaagcagaaaaacagatgaaagacaaa
caggacgaggagcagaggcttcaagaggaagaggaggacaagaagcgcaaggaggaggag
gaggcagaggacaaggaggatgaggaggacaaagatgaggacgaggaggatgaggaggac
aaagaggaagatgaggaggaagatgccactggccaggccaaggatgagctgtag
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