Sciurus carolinensis (gray squirrel): 124969174
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Entry
124969174 CDS
T08117
Name
(RefSeq) UV excision repair protein RAD23 homolog A isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03420
Nucleotide excision repair
ncar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124969174
09124 Replication and repair
03420 Nucleotide excision repair
124969174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124969174
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124969174
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124969174
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124969174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
USP_UIM_N
Rad60-SLD_2
Crinkler
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
124969174
NCBI-ProteinID:
XP_047387977
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All DBs
Position
17:complement(15118727..15124318)
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AA seq
363 aa
AA seq
DB search
MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP
IRDYRIDEKNFVVVMVTKAKAGQGTSAPPEVSPTAVPESSTPFPPTPASGMSHPPPTSRE
DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLAEIMSMGYERERV
VAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQ
FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE
VGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF
DDE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaccatcacgcttaaaacgctgcagcagcagaccttcaagatccgcatggaa
cctgacgagacggtgaaggtgctaaaggagaagatagaagctgagaaaggccgtgatgct
ttcccagtggctggacagaaactcatttacgccggcaagatcctgagcgatgatgtcccc
atcagggactaccgcattgatgagaagaactttgtggttgtcatggtgaccaaggccaaa
gctggtcagggtacctcagcacccccagaggtctcacccactgctgttccggagtcctcc
acacccttcccaccaacccctgcctcaggcatgtcccatcccccacctaccagcagagag
gacaagagcccatcggaggaatcagcccccacgacgtccccagagtctgtgtcaggctct
gttccctcttcaggtagcagcgggcgagaggaagacgcggcgtccacgctagtgactggc
tctgaatacgagacaatgttggcggagatcatgtccatgggctacgagcgggagcgggtc
gtggctgccctgagagccagctacaacaacccccaccgcgctgtggagtacctgctcacg
ggaattccggggagccctgagccagaacatggttctgtccaggagagccaggtgtctgag
cagccagccacagaagcagcaggagagaaccctttggagttcctgcgggaccagccccag
ttccagaacatgcggcaggtgattcagcagaacccagcactgctgcccgccctgcttcag
cagctgggccaggagaaccctcagcttttgcagcaaatcagcagacaccaggagcagttc
atccagatgttgaatgaaccccctggtgagctggcagacatctcagacgtggagggggag
gtgggcgccataggcgaggaggccccacagatgaactatatccaggtgacgccgcaggag
aaagaagctatagagaggttgaaggccctgggcttcccagagagtctggtgatccaggcc
tacttcgcatgtgaaaaaaacgagaacttggctgccaactttctcctgagtcagaacttt
gatgacgagtga
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