KEGG   Sciurus carolinensis (gray squirrel): 124969224
Entry
124969224         CDS       T08117                                 
Name
(RefSeq) macrophage colony-stimulating factor 1-like isoform X1
  KO
K05453  macrophage colony-stimulating factor 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04010  MAPK signaling pathway
ncar04014  Ras signaling pathway
ncar04015  Rap1 signaling pathway
ncar04060  Cytokine-cytokine receptor interaction
ncar04061  Viral protein interaction with cytokine and cytokine receptor
ncar04151  PI3K-Akt signaling pathway
ncar04380  Osteoclast differentiation
ncar04640  Hematopoietic cell lineage
ncar04668  TNF signaling pathway
ncar05010  Alzheimer disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124969224
   04014 Ras signaling pathway
    124969224
   04015 Rap1 signaling pathway
    124969224
   04668 TNF signaling pathway
    124969224
   04151 PI3K-Akt signaling pathway
    124969224
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124969224
   04061 Viral protein interaction with cytokine and cytokine receptor
    124969224
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    124969224
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124969224
 09160 Human Diseases
  09163 Immune disease
   05323 Rheumatoid arthritis
    124969224
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124969224
   05022 Pathways of neurodegeneration - multiple diseases
    124969224
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124969224
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  CSF and other factors
   124969224
SSDB
Motif
Pfam: CSF-1
Other DBs
NCBI-GeneID: 124969224
NCBI-ProteinID: XP_047388390
LinkDB
Position
1:complement(111401316..111419983)
AA seq 552 aa
MTAPGAAGRCPPTTWLGPRLLLVCLLVSRSIAKEVSEHCSHMIGNGHLQFLQQLIDSQME
TSCHITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFKDHTPNANAILRLQELSLRLK
SCFTKDYEDNDKACVRTFYETPLQLLEKIKNVFNETKNLLEEDWNVFSKNCNNSYAKCSS
QDVVTKPDCNCLYPKATPSSDLASVSPQQPLAPSNAQMAGLTWADSEGTEGSSLLPSEQP
LRTVDPGSAKQRPPRSTCESLKSPETPGLEDRPTGGPPQPRPSDGAPIPGVEDILDSALV
TNWAPEEASGEASESPGDQRAELSPSRPGGGSVQAETVRSRNLLSASSSLPMSTEDQQPV
DVTGTPLLKVDPTVQAQNHIPEKTDGSSTLPRDPPEPSSPRISSLRPQGFSNPATLSTKT
RLPRSHSWDIALPLGELEGKRSTRDRRSPTQLEGGRANEGAAGPLARFNSIPLTDTGHES
QHMGSSNAQIPGFVFHLLVPSIILVLLAVGGLLFYRWRRRSHRETQTLDSPTRQPEGSLL
TQDEDTQVELPV
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgaccgcgccgggcgccgccgggcgctgccctcccacgacatggctgggcccccgactg
ctgctggtgtgtctcctagtgagcaggagtattgccaaggaggtttcagaacactgtagc
cacatgattgggaacggacacctacagttcttgcagcagctgattgacagtcaaatggag
acctcatgccacattacctttgagtttgtagaccaggaacaactgaaagatcctgtgtgc
tatcttaagaaggcatttctcctggtacaagacataatggaggacaccatgcgcttcaaa
gatcacacccccaatgccaatgccatattacggctccaggaactctctttgaggctcaag
agctgcttcaccaaggattatgaggacaatgacaaggcctgtgtccgaactttctatgag
actcccctccagttgctggagaaaatcaagaacgtctttaatgaaacaaagaatctcctt
gaagaggactggaatgttttcagcaagaactgcaacaatagctatgctaaatgctccagc
caagatgtggtgaccaagcctgattgcaactgcctgtaccccaaagccacccctagcagt
gacctggcctctgtctcccctcagcagccccttgccccctccaatgcccaaatggctggc
ttgacctgggctgattctgaggggacagagggcagctccctcttgcccagtgagcagccc
cttcgcacagtggacccaggcagtgccaagcagcgaccacccaggagcacctgcgagagc
ctcaagtcaccagagaccccaggccttgaggacaggcccactgggggtccaccacagcct
cgcccctctgatggggcccccatccccggggtggaggacattctggactctgcactggtc
actaactgggccccagaagaggcctctggagaggctagtgagagtccaggagaccaaagg
gcagagctttccccctccaggccaggagggggcagtgtccaggcagagacagtcagatcc
agaaacctcctctcagcatcttcttcactccctatgtcaacagaggaccaacaaccagtg
gatgtaactggcactcccttgctcaaggtggatcccactgtccaagcccagaatcacatc
cctgagaagacagacggctcatccacgctgcccagagaccccccggagccaagctctccc
cggatctcctcactgcgtccccaaggcttcagcaacccagccactctctctactaagaca
cggcttcccagaagccactcctgggacattgcactgccccttggggagctggagggcaag
aggagcaccagggatcggagaagccccacacagctggaaggaggacgagcaaatgagggg
gcagctgggcccctggcccgttttaactccattcctttgactgacacaggccatgagagt
cagcacatgggatcctccaatgcccagatccctgggtttgtcttccatctgttggtgccc
agtatcatcctggtcttgctggctgttggcggcctcctgttctacaggtggaggcggagg
agccatcgagagactcagacattggattctcccacgaggcagccagagggcagcctcctg
acccaggatgaggacacacaggtggaactgccagtgtag

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