KEGG   Sciurus carolinensis (gray squirrel): 124969264
Entry
124969264         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor HES-1-like
  KO
K06054  hairy and enhancer of split 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03460  Fanconi anemia pathway
ncar04330  Notch signaling pathway
ncar04950  Maturity onset diabetes of the young
ncar05165  Human papillomavirus infection
ncar05169  Epstein-Barr virus infection
ncar05200  Pathways in cancer
ncar05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124969264
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124969264
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124969264
  09162 Cancer: specific types
   05224 Breast cancer
    124969264
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    124969264
   05165 Human papillomavirus infection
    124969264
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    124969264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124969264
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124969264
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    124969264
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     124969264
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 124969264
NCBI-ProteinID: XP_047388084
LinkDB
Position
17:complement(65853443..65854316)
AA seq 274 aa
MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHTKSSKPIMEKRGRARINESLCQLKTL
ILDALKKASSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
VTRFPSTCEGVNTEVRTRLLGHLANCMTQVNATTYPGQPHPALQAPPSPPPGPGSPQHTR
FAPPPPLLVPISGGAAPPPGGAPCKLGSQAGEAAXMPAPDGQFAFLIPNGAFAHSGPVIP
VYTSNSGTSVGPNAVSPSSGSSLTADSMWRPWRN
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccagccgatataatggagaaaaattcctcgtccccggtggctgctaccccagccagt
gtcaacacgacaccggataaaccaaagacagcatctgagcacacaaagtcatccaaacct
atcatggagaaaagaggaagagcaagaataaatgaaagcctgtgccagctgaaaacgctc
attttggatgctcttaagaaagctagctcccggcattccaagctggagaaggcggacatt
ctggaaatgacagtgaagcacctccggaacctgcagcgggcgcaaatgactgctgcgctg
agcacagacccgagcgtgctggggaagtaccgcgccggcttcagcgagtgcatgaacgag
gtgacccgcttcccgtccacgtgcgagggcgttaacaccgaggtacgcactcggctgctc
ggccacctggccaactgcatgacccaggtcaacgccacgacctaccctgggcagccgcat
cccgccttgcaggcgccgccgtcgcccccgccaggacccggcagcccccagcacacgcgg
ttcgcgccgccgccgccactgcttgtgcccatctccggaggtgcggcgccccctcccggc
ggcgcaccctgcaagttgggcagccaggctggagaggcggccnnaatgccggctcctgat
ggccaatttgccttcctcatcccgaatggggcgttcgctcacagcggcccagtcatccca
gtctacaccagcaacagtgggacctcagtgggtcccaacgcagtatctccttccagcggc
tcctcgctcactgcggactccatgtggaggccgtggcggaactga

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