Sciurus carolinensis (gray squirrel): 124969265
Help
Entry
124969265 CDS
T08117
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04015
Rap1 signaling pathway
ncar04151
PI3K-Akt signaling pathway
ncar04530
Tight junction
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
124969265
04151 PI3K-Akt signaling pathway
124969265
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124969265
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124969265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
124969265
NCBI-ProteinID:
XP_047388085
LinkDB
All DBs
Position
17:complement(64242011..64899950)
Genome browser
AA seq
1494 aa
AA seq
DB search
MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAENGEFPYVGAVATAEAAGLPGGGE
GPKLSEGELLLEVQGIRVSGLPRYDVLGVIDSCKEAVTFKAVRQGGRLNKDLRHFLNQRF
QKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVG
TYEGNYYGTPKPPSQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGIVHAENED
DDDVPEMNSSFTADSGDQAEHPLQEAALAPVNSSLAAAPITDPSQKFPQHLPLSAEDNLG
PLPQNWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELE
LPAGWEKIEDPVYGVYYVDHINRKTQYENPVLEAKRKKQLEQQQQPQQPSQQPPPPEEWT
EDHSSLVPPVIPNHPPSNPEPTREAPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTV
VGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA
SVDLELCRGYPLPFDPDDPNTSLVTSVAILDKEPIIVNGQETYDSPASHSSKTGKGSGIR
DARPSSPADVVSSGPHGYPNDTVSLASSIATQPELITVHIVKGPMGFGFTIADSPGGGGQ
RVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPV
PKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQVLPEYPPAEAPAPDQTDSSGQ
KKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREISSTNFGECQIPDYQEQDIFLWR
KETGFGFRILGGNEPGEPIYIGHIVPLGAADSDGRLRSGDELICVDGTPVIGKSHQLVVQ
LMQQAAKQGHVNLTVRRKVVFAVPKTENEVPSPASSHHSSNQPASLTEEKRTPQGSQNSL
NTVSSGSGSTSGIGSGGGGGSGVVSTVVSTVVQPYDVEIRRGENEGFGFVIVSSVSRPEA
GTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEA
GNTVTLRIIPGDESSNATLLTNAEKIATITTTHTPSQQGAPETRNTTKPKPESQFEFKAP
QATQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEI
NGETTKNMKHSRAIELIKNGGRRVRLFLRRGDGSVPEYDPSSDRNGPSAGAQGFPEVRAG
PEVRAGPSGRQHPSLESSYPPDVHKSSQHGEKRAHVKDPKGSREYSRQPNEHHTWNGTSR
KPDGGACRPKDRAPEGRRDAQPERMATNGPKRRSPEKRRDGTRSADNTLERREKHEKRRE
ASPERRRERSPTRRRDSSPSRRRRSLERLLDPRRSPERRRVASPERRAKSTDRRRARSPE
RRRERSLDKRSREDRGGHREREEANLKQEAGRSSRNPPEQRRRPYKECSTDLSI
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgatccagaaaaagaaccactggactagcagggttcacgaatgcaccgtg
aagcggggaccccagggcgagctgggggtgacggtgctggggggcgcggagaatggagag
tttccatatgttggagcggtggcgaccgcagaggcggcggggcttcccggcggtggcgag
ggcccgaagctgagcgagggggagctgcttctggaggtgcaggggatccgggtgtccggt
ttgccccgctatgacgtgctgggagtcatcgacagttgcaaggaggccgtcaccttcaaa
gccgtcagacaaggaggaaggctcaacaaggacctgcgacattttctcaatcagcgattc
cagaaagggtctcctgatcacgagctgcagcagaccataagggataacctttaccgccat
gctgtgccttgcacaacccgatctccgcgagaaggagaagtgcctggcgtggattacaac
tttctgactgtgaaggagttcttggacctcgagcagagcgggactcttctggaagtcggc
acctatgaaggaaactattatgggacacccaaacctcccagccagccagtcagtgggaaa
gtgatcacaacggatgccttgcaaagcctccagtctggctccaagcaggcgaccccgaag
cgcaccaagtcctacaatgacatgcaaaatgctggcatagtccacgcggagaatgaggac
gacgatgacgttcctgaaatgaacagtagctttacagccgattctggggaccaggccgaa
caccctctccaagaagcagctcttgcgcctgtgaatagtagcctcgccgccgctcccatc
acggacccttctcagaagttccctcagcacctacctctttccgcagaggataatttaggt
cctctgcctcaaaactgggagatggcctatacggaaaatggagaagtctactttatagac
cataatacaaaaacaacatcttggttagaccctcggtgcctgaacaagcagcagaagcct
ctagaagagtgtgaagatgatgaaggggtacacaccgaggagctggacagtgaactagaa
ctgcctgctggttgggaaaagatcgaagatcctgtctatggtgtctactatgtagaccac
atcaacaggaagacccagtatgagaacccagttctagaagccaaacggaagaagcagctg
gagcagcagcagcagccacagcagccctcgcagcagccgccacccccagaagagtggaca
gaagatcattcatccctcgtgcctcctgttattccaaaccaccccccaagcaatccggag
ccaaccagggaagctccacttcagggcaaacccttttttacgcgaaacccttctgagttg
aaaggcaagttcattcacacgaagctgcggaaaagcagtcgtggcttcggcttcacggtg
gtcggaggggacgaacctgacgagttcctccagatcaagagcttggtcctggacggtccc
gccgccctggatggcaagatggaaacaggcgacgtcatcgtcagcgtgaacgacacctgt
gtcctgggacacacgcatgcgcaggttgtgaaaatcttccagtccattcccattggtgcc
agcgtggaccttgagctctgccgaggttacccattgccttttgacccggatgaccccaat
accagtttagtgacctcggtggctattttggacaaagagcccattatcgtgaatggacag
gagacctacgactcgcccgccagccacagcagtaaaacgggcaaaggcagcggcatcagg
gacgcccggcccagcagcccggccgacgtggtctccagcggcccgcacggttatcccaac
gacacggtgtccctggcctcctccatcgccacgcagccggagctcatcaccgtgcacatc
gtcaaggggccgatggggtttggttttaccatcgcggacagcccgggtggcggtggccag
agagtgaaacagatcgtggacagccccaggtgccggggcctgaaggaaggggacctcatc
gtggaggtcaataagaagaacgtgcaggcgctgactcacaaccaggtggtggatatgctg
atcgagtgtcccaaggggagcgaggtcaccctgttggtgcagcgaggagggctgccagtt
cccaagaagagcccaaagtcgcaaccactggaaaggaaagacagccagaatagttcccag
cacagcgtttccagccaccggagcctgcacacagcctccccaagccacagcacgcaggta
cttccggagtacccacctgcggaggctcctgccccggatcagaccgacagctctgggcag
aagaaaccagatccttttaaaatctgggcccagtccaggagcatgtatgaaaaccgacct
atgtcaccttcgcctgcctcgggattgagcaagggggaaagagagagagaaatcagttcc
acgaattttggagaatgtcagattccagactaccaggaacaggacatcttcctctggaga
aaagagaccggattcggatttagaattctaggtggaaacgagccaggggaacctatttat
attggtcacatcgtgccactgggtgctgctgattcagacggccgcctgaggtctggcgat
gaattaatctgtgtggatgggacgccagtaattgggaaatcacaccagctcgtggtccag
cttatgcaacaagctgccaagcaaggccacgtcaatctcacagtgcggcgtaaagtggtg
tttgctgtccccaaaacggagaacgaggtgccctcgccagcctcctctcaccacagtagc
aaccagcctgcctcgctgacggaggagaagcgcaccccgcagggcagccagaactccctc
aacaccgtgagctcgggcagcggcagcaccagcggcattggcagcggcggcggcggcggc
agcggcgtggtcagcaccgtggtcagcaccgtggtgcagccctacgacgtggagatccgg
cgcggggagaacgagggtttcggcttcgtcatcgtgtcctcggtgagcaggcccgaagca
ggcacgaccttcgcaggcaatgcatgtgtagctatgcctcacaaaataggtcggattatt
gaggggagtcctgctgaccgctgtggcaagctgaaagtaggagaccggatcttggcagta
aatggatgttccatcaccaacaaatcccattcagacattgtcaacctaatcaaggaagca
ggaaacacagttaccctccgcatcattcccggggatgagtcctcaaatgccaccttgctg
accaatgcagagaagattgccaccatcaccaccacacacaccccttctcagcaaggggcc
ccggagacaaggaacaccaccaaaccaaagccggaatctcagttcgagttcaaagctccc
caggccacccaggagcaggatttttacactgtggaactggaaagaggagccaagggattt
ggcttcagtcttcgagggggtcgagaatataacatggacctctatgttctgcgcttagca
gaggacggtcctgcagaaagatgtggaaagatgaggattggtgatgaaattctagaaatc
aatggcgagaccaccaaaaacatgaagcattctcgggccattgaactgattaagaatggt
ggccgcagagttcgtctgtttctgaggcggggagacggctcagtcccagaatatgacccc
agcagcgaccggaacggcccctccgccggtgcacaaggctttccggaagtgagggccgga
ccggaagtgagggccggaccgtccggccgccagcacccatcattggagtccagttaccca
cccgacgttcacaaatcatcacaacatggggaaaagcgggcacacgtgaaagatccaaaa
ggcagcagagagtacagcagacaacccaatgaacaccacacctggaatggaacttctcga
aaacccgacggcggggcatgccgacccaaggaccgggcgcccgagggacgcagagacgcg
cagccagagcggatggcgaccaacggacccaagaggagatccccggagaagcgccgggac
ggcacccgcagcgccgacaacactctggagaggagggagaagcacgagaagaggagagag
gcgtctcccgagcgcagacgagagcggtcacccacccgcagaagggacagctcgcccagc
cggcggcggcggtccctcgaaagactcctggatcccagaaggtccccggagcgaaggaga
gtggcctcgccggagaggagggccaagtccaccgatcgcaggcgggcccggtcccccgag
cgcaggagagagcgttcgctggacaaaaggagcagagaggacagaggcggccaccgcgag
cgcgaagaggcgaatctgaagcaggaagccggcagaagttccagaaatcccccggagcag
aggaggcgaccttataaagaatgtagcaccgacctcagtatctga
DBGET
integrated database retrieval system
