Sciurus carolinensis (gray squirrel): 124969276
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Entry
124969276 CDS
T08117
Name
(RefSeq) dynein axonemal intermediate chain 3-like isoform X1
KO
K24722
dynein axonemal intermediate chain 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124969276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124969276
04812 Cytoskeleton proteins [BR:
ncar04812
]
124969276
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Dynein arm
124969276
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124969276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
EPCAM-Trop-2_C
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
124969276
NCBI-ProteinID:
XP_047388145
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All DBs
Position
1:complement(137642473..137704366)
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AA seq
898 aa
AA seq
DB search
MAPKAQKGKKASGQKKATGGKKKPKPLPVTEEEEPLNMESMGHPEIYPLVLTTKTQEIFN
CRIDEDVTDEVPYKLIKKEDIFEDLQNRAAVSDFHPVKKIVQEYPGDELLLVYDKDFKYG
LNFYLIATEEGKENYLNPPELPPEEQEENKELIPEDIYVYHPPLSKPWVSLGSEKEIEEE
SVKESTKQITYMISRKRNQFGAPVTFSDQNASSAKDAYIECTAYPDKNFTLKKLEKDIGM
QVIPHIKNISTQTRWTYPKNATTQYHAREFSEEEREKLGKSKSLTDFLKKVSTSVEIALQ
QNEIMNTFIEDWRCLAEEEGAFGDKTDTHLKEYQSFTDLHNTTEKKITCISWHPAIYGLI
AVSVAVRLSFEERVHLSGKLLLQPSLILFWSFSDPIHPQLMLESPEDIFCFQFCPTDPNI
IAGGCINGQIVLWDITAHADRIENIKASGRSKKVALKPMFLLEPESNKESIFIRHCAVSS
IESGHKKIITDIQWLPDTFEINRMGFVYENRNGICCQLATCSADCTICFWDIRPQKPLTP
QPTEKKKEESIEIPFDVPSTFLHLDLSWKPLAKIKLSKGETSLDHCPTKISLIEDHLLYK
TQDKILAQTKSLKAGETSPYHNLEGGMTDHLKPLEDFCTKFFVGTEEGEVIYTDWKLERD
PDTGRFMTKKPVNLYTVHDGFVHTVQRSPFYNDIVLTIGGWNMAIWKEGVMTGPLVQSCC
APKMYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPALSQNICITMITYIKPWTFSP
KQQFIAIADYYGTLHILEIPWTLSHPSVNEIASVNYYFEREVKHLEYVEQRKIIRDQEKK
EMDMEMEKKKVKTYQKSKEQAEAELKMEYESYLELEKATLINLGLIKETEKVSYMDLI
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaaagctcaaaagggaaagaaagcaagtggtcaaaaaaaggccacaggtgga
aaaaaaaaacctaaaccattacctgttactgaagaagaggaaccattaaatatggagagc
atgggtcatcctgaaatttatcctttagtattaactaccaagactcaggaaatattcaac
tgccgaatagatgaagatgtcacagatgaagtaccttataagcttatcaaaaaagaagat
atttttgaagacttgcaaaacagagctgcagtatccgatttccacccagtcaaaaaaatt
gtccaggaatatcctggagatgagcttctgcttgtttatgacaaagatttcaaatatgga
ctcaacttttatcttattgccactgaagagggcaaggaaaactatttaaatcccccagaa
ttaccaccagaagaacaggaagaaaataaagaacttattcctgaagacatatatgtttac
cacccacctctctctaaaccatgggtttctttaggcagtgaaaaagaaattgaggaagaa
tcagtgaaggaatctacaaagcagattacatatatgatttctcgaaaacgaaatcaattt
ggtgcaccagttacattcagtgaccagaatgcttccagtgcaaaagatgcctatattgaa
tgtacagcctacccagataaaaacttcacccttaaaaaactcgagaaagatatcggcatg
caagtaatcccccatatcaagaacataagcactcagacaagatggacatatcccaaaaat
gctactacacaatatcatgcaagagaattctccgaagaggaaagagaaaaacttggaaaa
tcaaagtctttgactgattttcttaagaaggtgtccacaagtgttgaaatagccctgcag
caaaatgaaatcatgaacacgttcatcgaggactggaggtgcctggcggaagaagaaggc
gcctttggggataaaactgacactcacctgaaagagtaccagtcctttactgaccttcat
aacaccacagaaaaaaagattacctgcatctcatggcaccctgctatctatgggctaata
gctgtgtcagtggctgtgcgtctctcctttgaagagagagtccacttatctggtaaatta
ttgctgcaaccatccttgattttattctggagtttctctgatcccatacatcctcagcta
atgctggagagccccgaagatatcttctgcttccaattctgtccgactgaccctaacatc
attgctggaggctgtataaatggacagattgtcttgtgggacatcaccgcacacgcggat
cgcatagaaaacattaaggcgagtggcagaagtaaaaaggtggcactcaagcctatgttt
ctccttgaaccggaaagtaataaagaatccatctttatcagacactgtgctgtctcttca
atagaaagtggacataagaaaataattacagacatacaatggctgcctgacacattcgag
attaacagaatgggctttgtctacgagaatcgaaatggaatatgctgtcagcttgccaca
tgctcagcagattgcacaatttgtttctgggatattagaccacagaaacctttaactcct
cagccaacagaaaaaaagaaagaagaaagtattgaaattccttttgatgtaccatctact
tttttgcatctagatctctcctggaaacctctcgctaagataaagctgtctaagggcgaa
acaagtttagaccactgcccaaccaagataagcctgattgaagaccatcttctttacaaa
acacaagacaaaatattagcccagaccaaatcattgaaggcaggagaaactagcccgtac
cacaatctggaaggtgggatgacagatcatctcaagccgctggaagacttctgcacaaag
ttcttcgtggggacagaggaaggtgaagtgatatacacagattggaagcttgaaagagat
cccgacactggacgatttatgacaaaaaagccagtgaacctctacactgtccacgatgga
tttgtccacaccgtccaacgatcacctttttacaatgacattgtcctcaccattggtggg
tggaacatggccatctggaaagaaggtgttatgaccggacccctcgttcaatcatgctgt
gcaccaaaaatgtacacctcaggacactggtccctgacaagacccggagttttctatatt
ggccgagaagacggatacattgatatctgggacctgctggagaaaacccatgaaccagct
ctgtcacaaaatatttgcataactatgatcacctatatcaagccctggaccttttctcct
aagcaacaatttatagccatagctgattattatggaacactgcatatattagaaattccg
tggacattaagtcacccttccgtcaatgagatagcaagcgttaactactacttcgaaaga
gaggtcaagcatctggaatatgtagaacagcgcaaaattattcgtgaccaagaaaagaag
gaaatggacatggaaatggagaagaaaaaagttaaaacatatcagaagtcaaaagaacaa
gcagaagctgaattgaaaatggaatacgagagctatttggagctagaaaaggccacgctc
atcaatcttggcctcatcaaagagaccgagaaggtgtcatacatggacttgatatag
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