Sciurus carolinensis (gray squirrel): 124969401
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Entry
124969401 CDS
T08117
Name
(RefSeq) neurobeachin-like protein 2 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124969401
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Others
124969401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
WD40
PH_BEACH
WD40_WDHD1_1st
WD40_Prp19
Neurobeachin
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
EIF3I
WDR55
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
124969401
NCBI-ProteinID:
XP_047388282
LinkDB
All DBs
Position
17:complement(24117728..24148724)
Genome browser
AA seq
2745 aa
AA seq
DB search
MAASERLYELWLLYYAQKDLGYLQQWLKAFVGAFEKSISLSSLEPRRPEEAGTEVPLLPL
DALHVLAEQLDQKDLEQALLLLKLFIILCRNLENVEAGWGQVLGPPVLALLTGLVAELKG
PPTPQECRGTQLENVALHALLLCEGLFDPYQTWRRQHRGEVISSKEKSKYKFPPATLPCE
FSAFFQESLQDADRLPPMLLLRLIHLFGAVLAGGKENGQMAVSAGSVQGLLGVVHGCSSG
PAQDPHLVPLALEALVGAVHVLHASRTPPRGPELRALLEGYFRVLNASWPATSNSGPEEA
LVTLRVNMLDAIPRMLACEDRPVLQATFLSNNCFEHLIRLIQNSKLYLQARAPPEGDSDL
ATRLLTEPDVQKVLDQDTDAIAVHVVRVLTCIMSGSPSAKEVFKERIGYLHLQEVLQSHG
PPTHRLLQELLNMAVEGDHSICPPPPICNEQPLLVLMQWLPSLPTAELRLFLAQRLWWLC
NSCAASRATCVQAGLVGYLLETLNTGIALEARCQEQLLALLQALGRVSLRPLELRRLLRP
PPELDSGPGGAEAGKARHAGAIIRALSGMARHQGPARALCYFDLTPSMAGIMVPSVQRWP
GPAFTFHAWLCLHPTDAVPAPTSTRPLQRKQLYSFFTSSGSGFEAFFTAAGTLVVAVCTR
KEYLTMSLPEVSFADSVWHCVAIIHVPGRRPFSQNLVHVYKDGHLVKTAPLRCPSLSEPF
SSCCIGSAGHRTTTTTTGLPTPSVHAALAHAHPSLTRSQSVPASVALGWGSGLAAPLQEG
SISSTLAGTQDTRWGSPTSLEGELGAVAIFHEALQAATLRVLCALGPNEPAPFKPEGDLH
ELGAKLLLHYSPQACKNNICLDLSPSHGLDGRLTGHRVETWDVKDVVNCVGGMGVLLPLL
ERVALQPQEAEAGPAETYDLLGPELTSGHNTQGLLLPLGKSSEGRMERNAVAAFLLMLRN
FLQAHTVNQESLVQCQGPAIIGALLRKVPSWAMDMNVLMSAQLLMEQVASENCGPLLYLL
YQHLLFNFHLWTLSDFAVRLGHIQYMSSIIREHRQKLRKKYGVQFILDALRTHYSLQRER
PLAADDLRTVQTSLLGLAREFLVRSFSADDVQVLLSFLAAMGDDGQVVGALDLLLALLQG
SPAQESLAVFLLEPGNLEVLLALLVRPRSLPLLPDRVCKILRRLQQNERLPEKSRQRLRL
PESGLQGLVACLPEGTICPQLCQGLYKLLLGADSLNLSDLLAVVQLSLQADLSVRLDICR
QLFHLIYGQPDVVRLLARQAGWQDVLTRLYVLEAATAGGPPPFPPELTTSPEPTLPLPPT
ESPAEPGDVFLPSEVPCPDSDAFYHALSPFCTPFDLGLERASVGSGNTAGGGSSSGTITP
ASQPGTPSPLDGPRPFPTAPGRHSSSLSNVLEDGSLPEPTISGDDTSNTSNPQQAPEEEL
CNLLTNVLFSVTWRGVEGSDEAAWRERGQVFSVLTQLGASATLVRPPDCIKRSLLEMMLE
SALTDIKEAPPGFLASLTQQALWLLRLLQDFLCAEGHGNQELWSEKLFEGVCSLLDRLGA
WPHLANSAADLREMAQIGLRLVLGYILLEDPQLHAQAYVRLHTLLQTAVPARREEACYVL
SKLEAALGRALSTSSSETATEHPQPTSAATAASERCSWLVPLVRTLLDRAYEPLGLQWGL
PSLPPTNGSPTFFEDFQAFCTTPEWRHFIDKQVQPTMSKFEMDTYAKSHDLMSGFWNACY
DTLMSSGQRRQRERTQSRRAFQELVLEPAQRRARLEGLRYVATLKQQAAQHSTALLHWGA
LWRQLSSPCGAWALRNPPPSHWKLSSAETYSRMRLKLVPNHHFDPHLEASALRDNLGEAP
LTPTEEASLPLAVTKEAKVGTPTEELQEDQLGEDELAVLETLMEATELDEQREKLVLSAE
CQLVTVVAVVPGLLEVTTQHVYFYDGSTERVETEEGIGHDFRRPLAQLREVHLRRFNLRR
SALELFFIDQSNYFLNFPCKVAGTSASSPCQAPRPQPCPIPPHTQVRNQVYSWLLRLRPP
TQGYLSSRSPQEMLRASGLTQKWVQREISNFEYLMQLNTIAGRTYNDLSQYPVFPWVLQD
YVSPTLDLSNPAVFRDLSKPIGVVNPKHAQLVREKYESFEDPAGTIDKFHYGTHYSNAAG
VMHYLIRVEPFTSLHVQLQSGRFDCSDRQFHSVAAAWQARLESPADVKELIPEFFYFPDF
LENQNGFDLGCLQLTNEKVGDVVLPPWASSPEDFIQQHRRALESEYVSAHLHEWIDLIFG
YKQRGPAAEEALNVFYYCTYEGAVDLDHVADERERKALEGIISNFGQTPCQLLKEPHPAR
LSAEEAAHRLARLDTNSPSIFQHLDQLKAFFAEVISDGIPLVLALVPHRQPHSFITQGSP
DLLVTVSASGLLGTHNWLPYDRNINNYFSFSKDPTMGNPKTQRLLSGPWVPGSGVNGQAL
AVAPDGKLLFSGGYWDGSLRVTALPRGKLLNQLSRHLDIVTCLALDTCGIYLISGSRDTT
CMVWRLLQQGGLSPKPVQVLYGHEAAVSCVAISTELDMAVSGSEDGTVIIHTVRRGQFVA
ALRPPGATLPGPVSHLALGSEGQIVVQSSAWERPGAQVTYSLHLYSVNGRLRASLPLAEQ
PTALAVTEDFVLLGTAQCALHILHLNKLLPAAPPLPMKVPIRSVAVTKERSHVLVGLEDG
KLIVVGAGQPSEVRSSQFARKLWRSSRRISQVSSGETEYNPGEAR
NT seq
8238 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcggagcggctctacgagttgtggctgctctactacgcgcagaaggacctg
ggctacttgcagcaatggctgaaggcctttgtgggagccttcgagaagagcatctcactg
tcctccctggaaccacgaaggccagaggaggcagggacggaggtccccctactgccacta
gatgccctgcatgtgctggccgagcaactggaccagaaggacctggagcaagccctgctg
ctgctcaagcttttcatcattctctgcaggaacttggagaatgtggaggcaggctggggc
caggtgctggggcccccagtgctggcgctgctgacggggctggtggctgagctcaaagga
cccccaacaccacaggagtgtcgagggacccagctggagaatgtagcccttcatgccctg
ctcctttgtgagggcctctttgacccctaccagacctggcggcgccagcaccgtggggaa
gtcatcagctccaaggagaagagcaaatacaagttccctcctgccactttgccctgtgaa
ttcagcgccttcttccaagagagcctgcaggatgcagaccgcttgcctcctatgctgctt
ttgcggctcatccacctctttggcgctgtccttgcaggaggaaaggagaacgggcagatg
gctgtgagtgctggctctgtgcagggcctgctgggtgttgtccacggctgcagcagtgga
ccggcccaggacccccacctagtgccactggctctagaggcactggtgggtgcggtccat
gtcctgcatgccagccgcacacccccccgagggccagagctccgtgccctgctggagggc
tactttcgtgtccttaacgccagctggcctgctacttcaaactcaggccccgaagaggcc
cttgtcaccctgcgggtcaacatgctcgatgccatccccaggatgctggcatgtgaggat
cggccagtgctgcaggctaccttcctcagcaacaattgctttgagcacctcattcgcctg
attcagaacagcaagctgtacctgcaggcccgggcgccccctgagggggacagtgacctg
gctacccggttactgacagagcccgatgtccagaaggtactggatcaggatacagatgcc
atcgcagtccatgtagtcagagtgctgacctgcatcatgagtggctccccatcagccaag
gaggtattcaaggaacgcatcggctacctgcacctgcaggaggtcctgcagagccacggg
cccccgacccatcggttgttgcaagagctgcttaacatggctgtggagggtgaccacagc
atatgcccgcctccaccaatctgcaatgagcaaccgttgctggtgctgatgcagtggctg
ccatcactgcccacagctgagctgcggctctttctagctcaacgcctctggtggctctgt
aacagctgtgctgccagccgtgccacctgtgtgcaagcaggcctggtgggctacctgcta
gagacactcaacacaggaatagccctggaggcccggtgccaagagcagctgttggcactg
ctgcaagcactgggccgtgtgtcactaaggcccttggagcttcgtcgcctgctgcgtccc
ccaccagagctggactcgggaccaggtggagctgaggctgggaaggctcgacatgcgggt
gctatcattcgagcactgtcaggcatggcccggcaccagggtcctgcacgggcactgtgc
tactttgacctcacgcccagcatggcaggcatcatggtgccctctgtacagcgatggcca
ggacctgcctttaccttccatgcctggctctgtttgcaccccacggatgcagtgcctgcc
ccaacttccacccggccactccaacgaaagcagctgtacagcttcttcaccagcagtggc
tcagggtttgaggccttcttcacggcagctgggaccctggtggtggctgtgtgcacacgg
aaggagtacttgaccatgagcttgcctgaagtgtcttttgccgactctgtctggcattgt
gtagccatcatccatgtgcctgggcgccgacccttcagccagaacctggtccatgtctac
aaagatggccatctggtcaaaacagcaccccttcgctgcccttccctcagtgagcctttc
tcctcctgctgtatcggctctgctgggcaccgcacaacgaccaccaccacggggctgccc
acaccatcagtccatgctgccctggctcatgctcacccctccctcacccgatcccagtca
gtcccagcctccgtagcgctgggctgggggtctgggctggcagcccccctgcaggagggc
agcatcagctccacccttgcaggcacccaggacactcgatggggcagccccacatccctg
gagggtgagctgggggctgtggccatcttccatgaagcgctgcaggcagccaccctgagg
gtcctgtgtgctctggggcccaatgagccagcccccttcaaacctgagggtgatctgcac
gagctgggtgccaagttgctcctccattactcacctcaggcctgtaagaacaacatctgc
ctggacctgtcgcctagccatgggctggatggccgtctgacaggacaccgggtggagaca
tgggacgtgaaggatgtggtgaactgtgtcgggggcatgggggtgttgctgcccctgctg
gagcgagtggctctgcagccccaagaggctgaggcaggtccagccgagacttatgacctt
ttggggcctgaactgacctctggccacaacactcagggcctgcttctccctctgggcaag
tcttcagaggggcggatggagaggaacgcagtggcagcctttctgctgatgctgaggaac
ttcttgcaggcccacactgtgaaccaggagagcctggtgcagtgccaggggcctgccatc
atcggggccctcctgcgcaaggtccccagctgggccatggacatgaacgtactcatgtct
gcccagctgctgatggagcaggtggcatctgagaactgtgggcccctcctctacctgctc
tatcagcatttgctcttcaactttcacctctggaccctcagtgattttgctgtgcgcctt
ggccacatccaatacatgtccagcatcatccgtgagcacagacagaagttgcggaagaaa
tacggggtccagttcatccttgatgctctgcgcacccactacagcctgcaaagggagcgc
cccctcgcagctgacgacctgcgcacagtgcagacctcccttctgggcctggcgcgcgag
ttcctggtacggagcttctctgctgacgatgtgcaggtcctactgagctttttggcagcc
atgggtgatgatggccaggtggtaggcgcactggatctgctgctggccctgcttcagggc
tccccagcacaggagtccttggctgtcttcctgttggagccagggaacctcgaggtgctg
ctggcgctgctggtgcgaccaaggtcactgcccctgctgcctgaccgagtttgcaagatc
ctgcgcagactgcaacagaatgagcggttacctgagaagagccgccagcggctgcgactg
ccagagagtggcctgcaaggcctcgttgcctgtctgcccgaggggaccatctgcccccag
ctctgccaaggcctttacaagctgttactgggggcagatagcctgaacctctcagatctg
ttggctgtggtgcagctgtcccttcaggctgacctcagtgtccgcctggacatctgtcgc
cagctcttccacctcatctacggacagccagatgtagtgcgactgctggcccgacaggcc
gggtggcaggatgtcctgacccggctgtatgtcctggaggctgccacagctggtggcccc
ccaccctttcccccagagctaactacctccccagagccaaccctgcccctgccgcccact
gagtctcctgccgagcctggggatgtcttcctgccctcggaggtcccttgccctgactct
gatgccttttaccatgctctttccccattctgcacacccttcgacctgggcctggaacgg
gccagtgtgggctcaggcaacactgccggtggtggcagcagcagcgggacaatcactcca
gccagccagcctggcacaccttccccgctggatgggccacgacccttccccactgcccct
ggccgccatagctccagtctctccaatgtgctggaggatggcagcctcccagagcccacc
atcagtggagacgacacctctaacaccagcaaccctcagcaagcccccgaggaggagctg
tgtaatctgctcaccaacgtactgttctcagtgacatggcggggcgtggagggcagcgac
gaggctgcctggagggagcgtggccaggtcttctcagtgctcactcagctgggggcctcg
gccacacttgtgcgcccaccagactgcatcaagcgcagcctcctggagatgatgctggag
tcagctctgaccgacattaaggaggctcccccagggttcctggccagccttacccagcag
gcactttggctgctgcgcctgctgcaggacttcctatgtgctgagggccatggtaaccag
gagttatggagtgagaagctcttcgaaggtgtgtgtagcctgctcgatcgcctgggagcc
tggccacacctggccaacagtgcagctgatctccgtgagatggcacagattggccttcgt
ctcgtgcttggctacatcctgttggaggatccacagctgcatgctcaggcctacgtgagg
ctgcacaccctcctgcagactgcagtgccggcccgccgcgaggaggcctgctatgtgctc
tccaagctggaggctgcacttggccgggcactgagcacctcttcttccgagacagccact
gagcatccacagcccacatctgcagccaccgcagcctctgagcgctgctcatggctggtg
ccactggtgcgcacactgctggaccgtgcctatgagccattggggctacagtgggggctg
ccctccctgcccccaaccaacggcagccccaccttcttcgaggactttcaggctttttgt
accactcctgaatggcgccacttcatcgacaagcaggtgcagcccaccatgtcgaagttt
gaaatggacacatatgccaagagccatgaccttatgtcgggcttctggaatgcctgctat
gacacactcatgagcagtgggcagcggcgccagcgggaacgcacccagagtcgaagggcc
ttccaggagctggtgctggagcctgcacagcggcgggcgcgcctcgaggggctgcgctat
gtggcgacgctgaagcaacaggcagcgcagcactctacagccctgctgcactggggggct
ttgtggcgccagctctccagcccctgtggggcctgggcactcaggaatcccccgccctct
cattggaagctgtccagtgctgagacgtactcccgcatgcgtctgaagctggtgcccaac
catcacttcgaccctcacctggaagccagtgccctgcgtgacaatctgggtgaggccccc
ctgacacccacggaggaggcctcactgcctctggcagtaaccaaagaggccaaagtcggc
actccaacggaagagttgcaggaagaccaactaggagaggacgagctggctgtgctggag
accctgatggaagcaacagaactggatgagcagcgagagaaactggtgctgtcggccgag
tgtcagctggtcaccgttgtggctgtggtcccaggattgctggaggtcaccacacaacat
gtgtacttctatgatggcagtactgagcgtgtggaaactgaggagggcattggccacgat
ttccggcgccctctggcccagctgcgtgaggtccatctgcggcgcttcaacttgcgccgt
tctgcgcttgaactcttcttcatcgatcagtccaactacttcctcaacttcccgtgcaag
gtggctgggacctcagcctcatcaccttgccaggctcccaggccccagccctgccccatc
ccaccccatacccaggttcggaaccaggtgtactcatggctcctgcgtctgcggccaccc
acccaaggctacctaagcagccgctccccccaggagatgctgcgtgcctcaggccttacc
cagaaatgggtacagcgtgagatatccaactttgaatacttgatgcaactcaacaccatt
gccgggcgcacctacaacgacctgtctcagtaccctgtgttcccctgggtcttacaggac
tatgtgtccccaaccctggacctcagcaacccggccgtcttccgggacctgtccaaaccc
atcggtgtggtgaaccccaagcatgcccagctcgtgagggagaaatatgagagctttgag
gaccctgccggcacaattgacaagttccactatggcactcactactccaatgcagcaggc
gtgatgcactacctcatccgagtggaacccttcacctccttgcacgtccagctgcagagt
ggccgctttgactgctctgaccggcagttccactccgtggcagcagcctggcaggcacgc
ctggagagccctgccgatgtgaaggagctcatcccagagttcttctacttccctgacttc
ctggaaaaccagaatggctttgacctgggctgcctccagctgacgaacgagaaggtgggt
gatgtggtgctgcccccgtgggccagctctcctgaagatttcatccagcaacaccgccgg
gctctggagtcagagtatgtgtctgcccacctgcatgagtggatcgacctcatctttggc
tacaagcagcggggaccagctgccgaggaggccctcaatgtcttctattactgcacctat
gagggggccgtagacctggaccatgtggcagacgagcgggaacggaaggctctggagggc
attatcagcaactttggacagactccctgtcagctgctaaaggaaccacacccagcacgg
ctctcagctgaggaagcagctcatcgcctcgcacgcctggacactaactcgcctagcatc
ttccagcacctggaccaactcaaggccttctttgcagaggttatcagtgatggcattccc
ctggtgctagctctggtcccccaccggcagccccactccttcatcacccagggctcccca
gacctgttggtgactgtgagtgccagtgggctgttgggcacccacaactggttgccttat
gaccgaaacataaacaactacttcagcttcagcaaagaccccactatgggcaatcccaag
acacagagactgctgagcggcccgtgggtgccaggcagtggagtgaatggacaagcactg
gcagtggctcctgatggaaaactgctcttcagcggtggctactgggatggcagcctgaga
gtgactgcattaccccgtggcaagctgctgaaccagctcagccgccatcttgatatagtg
acctgccttgcactggacacctgtggcatctacctcatctcaggctcccgggataccacg
tgcatggtgtggcggctcctgcagcagggtggcctttcaccaaagcctgtgcaggtccta
tacgggcatgaggctgcagtgagctgtgtggccattagcacggaacttgacatggctgtg
tctggatctgaggatggaactgtgatcatacatactgtacgccggggccagtttgtggca
gcactacgacctccaggtgccacattgcctggacccgtgtcccacctggcactggggtct
gaaggccagattgtggtacagagctcagcatgggaacgtcctggtgcccaggtcacctat
tcattgcacttgtactcagtgaatggaagattgcgagcttcactgcccctggcagagcag
cctacagccctggctgtgacagaggactttgttttgctgggcactgcccaatgtgccctg
cacatcctccacctgaacaaactgctccctgcagcacctcccctgcccatgaaggtgccc
attcgcagtgttgccgtcaccaaagagcgcagccacgtgctggtgggcctagaggatggc
aagttgatcgtggtgggagcagggcagccctccgaggtgcgcagcagccagtttgcacgg
aagctgtggcggtcctctcgtcgcatttcccaggtgtcttccggggaaacggagtacaac
cctggcgaggcacgctga
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integrated database retrieval system
